Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC7.85□□□□□ -1.15
Ubr4A2AN08 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Gm36858-201ENSMUST00000194501 2391 ntBASIC7.85□□□□□ -1.15
Ubr4A2AN08 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Gm45774-201ENSMUST00000211992 2665 ntBASIC7.85□□□□□ -1.15
Ubr4A2AN08 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Gm7553-201ENSMUST00000185805 1426 ntBASIC7.85□□□□□ -1.15
Ubr4A2AN08 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Gm4909-201ENSMUST00000118749 794 ntBASIC7.85□□□□□ -1.15
Ubr4A2AN08 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC7.85□□□□□ -1.15
Ubr4A2AN08 AC140406.1-201ENSMUST00000226481 465 ntBASIC7.85□□□□□ -1.15
Ubr4A2AN08 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Gm13297-201ENSMUST00000120205 934 ntBASIC7.85□□□□□ -1.15
Ubr4A2AN08 Gm7118-201ENSMUST00000200167 1003 ntBASIC7.85□□□□□ -1.15
Ubr4A2AN08 Gm6334-201ENSMUST00000207083 228 ntBASIC7.85□□□□□ -1.15
Ubr4A2AN08 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
Ubr4A2AN08 AC156560.2-201ENSMUST00000221232 264 ntBASIC7.85□□□□□ -1.15
Ubr4A2AN08 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Ubr4A2AN08 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Ubr4A2AN08 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Gm14017-201ENSMUST00000121934 386 ntBASIC7.84□□□□□ -1.15
Ubr4A2AN08 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC7.84□□□□□ -1.15
Ubr4A2AN08 AC165157.4-201ENSMUST00000220587 139 ntBASIC7.84□□□□□ -1.15
Ubr4A2AN08 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC7.84□□□□□ -1.15
Ubr4A2AN08 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Gm14452-201ENSMUST00000118680 1632 ntBASIC7.84□□□□□ -1.15
Ubr4A2AN08 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC7.84□□□□□ -1.15
Ubr4A2AN08 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC7.84□□□□□ -1.15
Ubr4A2AN08 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC7.84□□□□□ -1.15
Ubr4A2AN08 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Gm11331-201ENSMUST00000119764 288 ntBASIC7.84□□□□□ -1.15
Ubr4A2AN08 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC7.84□□□□□ -1.15
Ubr4A2AN08 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Ubr4A2AN08 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Gm45118-201ENSMUST00000208928 825 ntBASIC7.84□□□□□ -1.15
Ubr4A2AN08 Gm8598-201ENSMUST00000221184 836 ntBASIC7.84□□□□□ -1.15
Ubr4A2AN08 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Ubr4A2AN08 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC7.84□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms