Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
IsxA1A546 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.12□□□□□ -0.15
IsxA1A546 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IsxA1A546 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IsxA1A546 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IsxA1A546 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.12□□□□□ -0.15
IsxA1A546 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
IsxA1A546 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
IsxA1A546 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.12□□□□□ -0.15
IsxA1A546 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
IsxA1A546 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.12□□□□□ -0.15
IsxA1A546 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
IsxA1A546 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
IsxA1A546 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.12□□□□□ -0.15
IsxA1A546 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
IsxA1A546 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
IsxA1A546 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
IsxA1A546 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
IsxA1A546 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IsxA1A546 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IsxA1A546 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
IsxA1A546 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
IsxA1A546 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
IsxA1A546 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IsxA1A546 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
IsxA1A546 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IsxA1A546 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
IsxA1A546 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IsxA1A546 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IsxA1A546 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
IsxA1A546 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IsxA1A546 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IsxA1A546 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IsxA1A546 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
IsxA1A546 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IsxA1A546 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.11□□□□□ -0.15
IsxA1A546 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IsxA1A546 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IsxA1A546 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
IsxA1A546 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IsxA1A546 Gm2274-201ENSMUST00000184539 609 ntBASIC14.11□□□□□ -0.15
IsxA1A546 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
IsxA1A546 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.11□□□□□ -0.15
IsxA1A546 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IsxA1A546 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IsxA1A546 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.11□□□□□ -0.15
IsxA1A546 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IsxA1A546 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IsxA1A546 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
IsxA1A546 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IsxA1A546 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IsxA1A546 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
IsxA1A546 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
IsxA1A546 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IsxA1A546 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
IsxA1A546 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
IsxA1A546 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IsxA1A546 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
IsxA1A546 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IsxA1A546 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.11□□□□□ -0.15
IsxA1A546 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.11□□□□□ -0.15
IsxA1A546 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IsxA1A546 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
IsxA1A546 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IsxA1A546 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
IsxA1A546 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IsxA1A546 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
IsxA1A546 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
IsxA1A546 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IsxA1A546 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
IsxA1A546 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IsxA1A546 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IsxA1A546 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
IsxA1A546 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
IsxA1A546 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
IsxA1A546 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
IsxA1A546 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.1□□□□□ -0.15
IsxA1A546 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
IsxA1A546 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.1□□□□□ -0.15
IsxA1A546 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IsxA1A546 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.1□□□□□ -0.15
IsxA1A546 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.1□□□□□ -0.15
IsxA1A546 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.1□□□□□ -0.15
IsxA1A546 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
IsxA1A546 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IsxA1A546 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IsxA1A546 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IsxA1A546 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
IsxA1A546 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IsxA1A546 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IsxA1A546 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
IsxA1A546 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IsxA1A546 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
IsxA1A546 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IsxA1A546 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IsxA1A546 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IsxA1A546 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IsxA1A546 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IsxA1A546 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
IsxA1A546 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms