Protein–RNA interactions for Protein: A0A0U1RP08

1700028J19Rik, RIKEN cDNA 1700028J19 gene (Fragment), mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700028J19RikA0A0U1RP08 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
1700028J19RikA0A0U1RP08 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
1700028J19RikA0A0U1RP08 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
1700028J19RikA0A0U1RP08 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
1700028J19RikA0A0U1RP08 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
1700028J19RikA0A0U1RP08 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
1700028J19RikA0A0U1RP08 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
1700028J19RikA0A0U1RP08 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
1700028J19RikA0A0U1RP08 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
1700028J19RikA0A0U1RP08 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
1700028J19RikA0A0U1RP08 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
1700028J19RikA0A0U1RP08 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
1700028J19RikA0A0U1RP08 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
1700028J19RikA0A0U1RP08 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
1700028J19RikA0A0U1RP08 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
1700028J19RikA0A0U1RP08 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
1700028J19RikA0A0U1RP08 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
1700028J19RikA0A0U1RP08 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
1700028J19RikA0A0U1RP08 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
1700028J19RikA0A0U1RP08 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
1700028J19RikA0A0U1RP08 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
1700028J19RikA0A0U1RP08 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.24□□□□□ -0.13
1700028J19RikA0A0U1RP08 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
1700028J19RikA0A0U1RP08 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.24□□□□□ -0.13
1700028J19RikA0A0U1RP08 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.24□□□□□ -0.13
1700028J19RikA0A0U1RP08 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.24□□□□□ -0.13
1700028J19RikA0A0U1RP08 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
1700028J19RikA0A0U1RP08 Efs-202ENSMUST00000227037 2540 ntBASIC14.24□□□□□ -0.13
1700028J19RikA0A0U1RP08 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
1700028J19RikA0A0U1RP08 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
1700028J19RikA0A0U1RP08 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
1700028J19RikA0A0U1RP08 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.24□□□□□ -0.13
1700028J19RikA0A0U1RP08 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.24□□□□□ -0.13
1700028J19RikA0A0U1RP08 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
1700028J19RikA0A0U1RP08 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.24□□□□□ -0.13
1700028J19RikA0A0U1RP08 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.24□□□□□ -0.13
1700028J19RikA0A0U1RP08 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
1700028J19RikA0A0U1RP08 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
1700028J19RikA0A0U1RP08 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.22□□□□□ -0.13
1700028J19RikA0A0U1RP08 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
1700028J19RikA0A0U1RP08 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
1700028J19RikA0A0U1RP08 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
1700028J19RikA0A0U1RP08 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
1700028J19RikA0A0U1RP08 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
1700028J19RikA0A0U1RP08 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
1700028J19RikA0A0U1RP08 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
1700028J19RikA0A0U1RP08 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
1700028J19RikA0A0U1RP08 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
1700028J19RikA0A0U1RP08 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
1700028J19RikA0A0U1RP08 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
1700028J19RikA0A0U1RP08 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
1700028J19RikA0A0U1RP08 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.22□□□□□ -0.13
1700028J19RikA0A0U1RP08 Gm37153-201ENSMUST00000193637 231 ntBASIC14.22□□□□□ -0.13
1700028J19RikA0A0U1RP08 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.22□□□□□ -0.13
1700028J19RikA0A0U1RP08 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.22□□□□□ -0.13
1700028J19RikA0A0U1RP08 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
1700028J19RikA0A0U1RP08 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.22□□□□□ -0.13
1700028J19RikA0A0U1RP08 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
1700028J19RikA0A0U1RP08 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.22□□□□□ -0.13
1700028J19RikA0A0U1RP08 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
1700028J19RikA0A0U1RP08 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
1700028J19RikA0A0U1RP08 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.21□□□□□ -0.13
1700028J19RikA0A0U1RP08 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
1700028J19RikA0A0U1RP08 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
1700028J19RikA0A0U1RP08 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
1700028J19RikA0A0U1RP08 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms