Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Gm3272-201ENSMUST00000181181 1229 ntBASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Gm10566-201ENSMUST00000086739 996 ntBASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.81□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Gm16061-201ENSMUST00000122167 857 ntBASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Gm10653-202ENSMUST00000139570 835 ntBASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Gm20760-201ENSMUST00000179197 648 ntBASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Gm7213-201ENSMUST00000215977 950 ntBASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.79□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms