Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
BC053393A0A0B4J1F6 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
BC053393A0A0B4J1F6 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
BC053393A0A0B4J1F6 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
BC053393A0A0B4J1F6 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
BC053393A0A0B4J1F6 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
BC053393A0A0B4J1F6 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.14□□□□□ -0.47
BC053393A0A0B4J1F6 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BC053393A0A0B4J1F6 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BC053393A0A0B4J1F6 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BC053393A0A0B4J1F6 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
BC053393A0A0B4J1F6 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BC053393A0A0B4J1F6 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BC053393A0A0B4J1F6 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
BC053393A0A0B4J1F6 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BC053393A0A0B4J1F6 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BC053393A0A0B4J1F6 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
BC053393A0A0B4J1F6 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
BC053393A0A0B4J1F6 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BC053393A0A0B4J1F6 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
BC053393A0A0B4J1F6 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.14□□□□□ -0.47
BC053393A0A0B4J1F6 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BC053393A0A0B4J1F6 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
BC053393A0A0B4J1F6 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BC053393A0A0B4J1F6 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Olfr129-201ENSMUST00000122318 993 ntBASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Grk6-207ENSMUST00000225925 2769 ntBASIC12.12□□□□□ -0.47
BC053393A0A0B4J1F6 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms