Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-42A0A0A6YY38 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.96□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-42A0A0A6YY38 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.96□□□□□ -0.17
Ighv1-42A0A0A6YY38 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-42A0A0A6YY38 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ighv1-42A0A0A6YY38 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.96□□□□□ -0.18
Ighv1-42A0A0A6YY38 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.96□□□□□ -0.18
Ighv1-42A0A0A6YY38 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ighv1-42A0A0A6YY38 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Ighv1-42A0A0A6YY38 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ighv1-42A0A0A6YY38 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
Ighv1-42A0A0A6YY38 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ighv1-42A0A0A6YY38 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ighv1-42A0A0A6YY38 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ighv1-42A0A0A6YY38 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.96□□□□□ -0.18
Ighv1-42A0A0A6YY38 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ighv1-42A0A0A6YY38 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ighv1-42A0A0A6YY38 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ighv1-42A0A0A6YY38 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ighv1-42A0A0A6YY38 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ighv1-42A0A0A6YY38 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ighv1-42A0A0A6YY38 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ighv1-42A0A0A6YY38 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.95□□□□□ -0.18
Ighv1-42A0A0A6YY38 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ighv1-42A0A0A6YY38 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ighv1-42A0A0A6YY38 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.95□□□□□ -0.18
Ighv1-42A0A0A6YY38 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.95□□□□□ -0.18
Ighv1-42A0A0A6YY38 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.95□□□□□ -0.18
Ighv1-42A0A0A6YY38 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.95□□□□□ -0.18
Ighv1-42A0A0A6YY38 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ighv1-42A0A0A6YY38 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ighv1-42A0A0A6YY38 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ighv1-42A0A0A6YY38 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ighv1-42A0A0A6YY38 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ighv1-42A0A0A6YY38 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ighv1-42A0A0A6YY38 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ighv1-42A0A0A6YY38 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ighv1-42A0A0A6YY38 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-42A0A0A6YY38 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.94□□□□□ -0.18
Ighv1-42A0A0A6YY38 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-42A0A0A6YY38 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-42A0A0A6YY38 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-42A0A0A6YY38 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-42A0A0A6YY38 Gm14057-201ENSMUST00000120631 482 ntBASIC13.94□□□□□ -0.18
Ighv1-42A0A0A6YY38 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.94□□□□□ -0.18
Ighv1-42A0A0A6YY38 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.94□□□□□ -0.18
Ighv1-42A0A0A6YY38 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Ighv1-42A0A0A6YY38 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-42A0A0A6YY38 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-42A0A0A6YY38 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.94□□□□□ -0.18
Ighv1-42A0A0A6YY38 Gm38225-201ENSMUST00000194001 393 ntBASIC13.94□□□□□ -0.18
Ighv1-42A0A0A6YY38 Gm43767-201ENSMUST00000198933 381 ntBASIC13.94□□□□□ -0.18
Ighv1-42A0A0A6YY38 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-42A0A0A6YY38 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-42A0A0A6YY38 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-42A0A0A6YY38 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-42A0A0A6YY38 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-42A0A0A6YY38 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-42A0A0A6YY38 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ighv1-42A0A0A6YY38 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Ighv1-42A0A0A6YY38 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-42A0A0A6YY38 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-42A0A0A6YY38 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-42A0A0A6YY38 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-42A0A0A6YY38 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Ighv1-42A0A0A6YY38 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-42A0A0A6YY38 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-42A0A0A6YY38 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-42A0A0A6YY38 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-42A0A0A6YY38 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.93□□□□□ -0.18
Ighv1-42A0A0A6YY38 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-42A0A0A6YY38 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.93□□□□□ -0.18
Ighv1-42A0A0A6YY38 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-42A0A0A6YY38 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-42A0A0A6YY38 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-42A0A0A6YY38 Celf4-206ENSMUST00000224553 1729 ntBASIC13.93□□□□□ -0.18
Ighv1-42A0A0A6YY38 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-42A0A0A6YY38 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-42A0A0A6YY38 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-42A0A0A6YY38 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-42A0A0A6YY38 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.93□□□□□ -0.18
Ighv1-42A0A0A6YY38 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.93□□□□□ -0.18
Ighv1-42A0A0A6YY38 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-42A0A0A6YY38 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-42A0A0A6YY38 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-42A0A0A6YY38 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-42A0A0A6YY38 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-42A0A0A6YY38 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-42A0A0A6YY38 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-42A0A0A6YY38 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-42A0A0A6YY38 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-42A0A0A6YY38 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-42A0A0A6YY38 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Ighv1-42A0A0A6YY38 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-42A0A0A6YY38 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-42A0A0A6YY38 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-42A0A0A6YY38 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms