Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gm13337-201ENSMUST00000119183 1594 ntBASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gm6433-201ENSMUST00000118634 875 ntBASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gm10013-201ENSMUST00000106074 672 ntBASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 AC127302.2-201ENSMUST00000215212 268 ntBASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms