Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav6-4A0A075B6B4 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-4A0A075B6B4 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav6-4A0A075B6B4 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav6-4A0A075B6B4 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-4A0A075B6B4 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav6-4A0A075B6B4 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Gm10499-201ENSMUST00000174094 934 ntBASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav6-4A0A075B6B4 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 AC154527.4-201ENSMUST00000224364 1667 ntBASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Gm12350-201ENSMUST00000121208 462 ntBASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Trav6-4A0A075B6B4 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav6-4A0A075B6B4 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms