Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.05□□□□□ -0.48
Trav17A0A075B655 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.05□□□□□ -0.48
Trav17A0A075B655 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav17A0A075B655 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav17A0A075B655 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav17A0A075B655 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav17A0A075B655 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav17A0A075B655 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.04□□□□□ -0.48
Trav17A0A075B655 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav17A0A075B655 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav17A0A075B655 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav17A0A075B655 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav17A0A075B655 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav17A0A075B655 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav17A0A075B655 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav17A0A075B655 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.04□□□□□ -0.48
Trav17A0A075B655 Gm18032-201ENSMUST00000222541 538 ntBASIC12.04□□□□□ -0.48
Trav17A0A075B655 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav17A0A075B655 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav17A0A075B655 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav17A0A075B655 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav17A0A075B655 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav17A0A075B655 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav17A0A075B655 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav17A0A075B655 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Trav17A0A075B655 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav17A0A075B655 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav17A0A075B655 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav17A0A075B655 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav17A0A075B655 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav17A0A075B655 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav17A0A075B655 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav17A0A075B655 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav17A0A075B655 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav17A0A075B655 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav17A0A075B655 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav17A0A075B655 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav17A0A075B655 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav17A0A075B655 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav17A0A075B655 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav17A0A075B655 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav17A0A075B655 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav17A0A075B655 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav17A0A075B655 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav17A0A075B655 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav17A0A075B655 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav17A0A075B655 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trav17A0A075B655 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav17A0A075B655 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav17A0A075B655 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav17A0A075B655 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.03□□□□□ -0.48
Trav17A0A075B655 Gm19164-201ENSMUST00000210667 640 ntBASIC12.03□□□□□ -0.48
Trav17A0A075B655 Gm9172-201ENSMUST00000212092 954 ntBASIC12.03□□□□□ -0.48
Trav17A0A075B655 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav17A0A075B655 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav17A0A075B655 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trav17A0A075B655 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
Trav17A0A075B655 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav17A0A075B655 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav17A0A075B655 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav17A0A075B655 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav17A0A075B655 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav17A0A075B655 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav17A0A075B655 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav17A0A075B655 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav17A0A075B655 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav17A0A075B655 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms