Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav8-1A0A075B641 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav8-1A0A075B641 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav8-1A0A075B641 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav8-1A0A075B641 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav8-1A0A075B641 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav8-1A0A075B641 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav8-1A0A075B641 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav8-1A0A075B641 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav8-1A0A075B641 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Trav8-1A0A075B641 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Trav8-1A0A075B641 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav8-1A0A075B641 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav8-1A0A075B641 Gm36967-201ENSMUST00000193814 266 ntBASIC10.9□□□□□ -0.66
Trav8-1A0A075B641 Trmt13-210ENSMUST00000198454 880 ntBASIC10.9□□□□□ -0.66
Trav8-1A0A075B641 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC10.9□□□□□ -0.66
Trav8-1A0A075B641 Il3ra-202ENSMUST00000223589 738 ntBASIC10.9□□□□□ -0.66
Trav8-1A0A075B641 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav8-1A0A075B641 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav8-1A0A075B641 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav8-1A0A075B641 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav8-1A0A075B641 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav8-1A0A075B641 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav8-1A0A075B641 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav8-1A0A075B641 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav8-1A0A075B641 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Trav8-1A0A075B641 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav8-1A0A075B641 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Trav8-1A0A075B641 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav8-1A0A075B641 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Trav8-1A0A075B641 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav8-1A0A075B641 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav8-1A0A075B641 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC10.9□□□□□ -0.67
Trav8-1A0A075B641 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav8-1A0A075B641 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 AC122901.1-201ENSMUST00000214203 1790 ntBASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Gm43509-201ENSMUST00000196551 2594 ntBASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav8-1A0A075B641 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Gm9947-201ENSMUST00000067599 2920 ntBASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Gm37844-201ENSMUST00000192473 4097 ntBASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Gm12441-201ENSMUST00000121806 588 ntBASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms