Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Gm13559-201ENSMUST00000120476 863 ntBASIC11.48□□□□□ -0.57
Trav16nA0A075B634 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 AC134329.2-201ENSMUST00000217897 428 ntBASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16nA0A075B634 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Gm7507-201ENSMUST00000183053 1008 ntBASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Gm37055-201ENSMUST00000191866 133 ntBASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16nA0A075B634 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav16nA0A075B634 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav16nA0A075B634 Fbxl12-205ENSMUST00000140702 1555 ntBASIC11.46□□□□□ -0.57
Trav16nA0A075B634 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav16nA0A075B634 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav16nA0A075B634 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav16nA0A075B634 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav16nA0A075B634 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav16nA0A075B634 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav16nA0A075B634 Gm22240-201ENSMUST00000175225 82 ntBASIC11.46□□□□□ -0.57
Trav16nA0A075B634 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.46□□□□□ -0.57
Trav16nA0A075B634 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav16nA0A075B634 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Trav16nA0A075B634 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav16nA0A075B634 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav16nA0A075B634 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.46□□□□□ -0.58
Trav16nA0A075B634 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav16nA0A075B634 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav16nA0A075B634 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Trav16nA0A075B634 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Trav16nA0A075B634 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav16nA0A075B634 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav16nA0A075B634 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms