Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 AC121805.2-201ENSMUST00000218808 2538 ntBASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.72
Trav4n-4A0A075B615 AC124581.1-201ENSMUST00000225416 1399 ntBASIC10.52□□□□□ -0.72
Trav4n-4A0A075B615 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Trav4n-4A0A075B615 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.72
Trav4n-4A0A075B615 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav4n-4A0A075B615 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Trav4n-4A0A075B615 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav4n-4A0A075B615 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav4n-4A0A075B615 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 Gm19863-201ENSMUST00000192480 2218 ntBASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav4n-4A0A075B615 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Gm38197-201ENSMUST00000192320 2122 ntBASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Gm38027-201ENSMUST00000192315 235 ntBASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 AV356131-201ENSMUST00000206201 750 ntBASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Gm44672-201ENSMUST00000206944 1098 ntBASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 AC122769.4-201ENSMUST00000228166 901 ntBASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav4n-4A0A075B615 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms