Protein–RNA interactions for Protein: Q9Z260

Cldn8, Claudin-8, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn8Q9Z260 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn8Q9Z260 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn8Q9Z260 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn8Q9Z260 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn8Q9Z260 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn8Q9Z260 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn8Q9Z260 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn8Q9Z260 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cldn8Q9Z260 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cldn8Q9Z260 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn8Q9Z260 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn8Q9Z260 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn8Q9Z260 Gm10499-201ENSMUST00000174094 934 ntBASIC14.41□□□□□ -0.1
Cldn8Q9Z260 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cldn8Q9Z260 Gm4535-201ENSMUST00000182274 558 ntBASIC14.41□□□□□ -0.1
Cldn8Q9Z260 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn8Q9Z260 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn8Q9Z260 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn8Q9Z260 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn8Q9Z260 Gm10355-201ENSMUST00000097146 517 ntBASIC14.41□□□□□ -0.1
Cldn8Q9Z260 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.41□□□□□ -0.1
Cldn8Q9Z260 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn8Q9Z260 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn8Q9Z260 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn8Q9Z260 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn8Q9Z260 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cldn8Q9Z260 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn8Q9Z260 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn8Q9Z260 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn8Q9Z260 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn8Q9Z260 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn8Q9Z260 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn8Q9Z260 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cldn8Q9Z260 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cldn8Q9Z260 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn8Q9Z260 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn8Q9Z260 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn8Q9Z260 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn8Q9Z260 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn8Q9Z260 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn8Q9Z260 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn8Q9Z260 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn8Q9Z260 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn8Q9Z260 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn8Q9Z260 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn8Q9Z260 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Cldn8Q9Z260 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Cldn8Q9Z260 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cldn8Q9Z260 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn8Q9Z260 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.4□□□□□ -0.1
Cldn8Q9Z260 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.4□□□□□ -0.1
Cldn8Q9Z260 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.4□□□□□ -0.1
Cldn8Q9Z260 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn8Q9Z260 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn8Q9Z260 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cldn8Q9Z260 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn8Q9Z260 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn8Q9Z260 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn8Q9Z260 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn8Q9Z260 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn8Q9Z260 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Cldn8Q9Z260 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn8Q9Z260 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.39□□□□□ -0.11
Cldn8Q9Z260 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn8Q9Z260 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn8Q9Z260 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn8Q9Z260 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn8Q9Z260 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn8Q9Z260 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn8Q9Z260 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn8Q9Z260 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.39□□□□□ -0.11
Cldn8Q9Z260 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.39□□□□□ -0.11
Cldn8Q9Z260 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.39□□□□□ -0.11
Cldn8Q9Z260 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.39□□□□□ -0.11
Cldn8Q9Z260 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.39□□□□□ -0.11
Cldn8Q9Z260 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn8Q9Z260 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Cldn8Q9Z260 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn8Q9Z260 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn8Q9Z260 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cldn8Q9Z260 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn8Q9Z260 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.39□□□□□ -0.11
Cldn8Q9Z260 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn8Q9Z260 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cldn8Q9Z260 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.39□□□□□ -0.11
Cldn8Q9Z260 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn8Q9Z260 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn8Q9Z260 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn8Q9Z260 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Cldn8Q9Z260 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn8Q9Z260 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn8Q9Z260 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn8Q9Z260 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cldn8Q9Z260 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn8Q9Z260 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn8Q9Z260 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn8Q9Z260 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Cldn8Q9Z260 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn8Q9Z260 Gm12134-201ENSMUST00000122109 520 ntBASIC14.38□□□□□ -0.11
Cldn8Q9Z260 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms