Protein–RNA interactions for Protein: Q9Z0Z3

Skp2, S-phase kinase-associated protein 2, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skp2Q9Z0Z3 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Skp2Q9Z0Z3 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Skp2Q9Z0Z3 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Skp2Q9Z0Z3 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Skp2Q9Z0Z3 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
Skp2Q9Z0Z3 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Skp2Q9Z0Z3 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Skp2Q9Z0Z3 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Skp2Q9Z0Z3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Skp2Q9Z0Z3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Skp2Q9Z0Z3 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Skp2Q9Z0Z3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Skp2Q9Z0Z3 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Skp2Q9Z0Z3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Skp2Q9Z0Z3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Skp2Q9Z0Z3 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Skp2Q9Z0Z3 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Skp2Q9Z0Z3 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Skp2Q9Z0Z3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Skp2Q9Z0Z3 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Skp2Q9Z0Z3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.83□□□□□ -0.2
Skp2Q9Z0Z3 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Skp2Q9Z0Z3 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Skp2Q9Z0Z3 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Skp2Q9Z0Z3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Skp2Q9Z0Z3 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Skp2Q9Z0Z3 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Skp2Q9Z0Z3 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Skp2Q9Z0Z3 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Skp2Q9Z0Z3 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Skp2Q9Z0Z3 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.83□□□□□ -0.2
Skp2Q9Z0Z3 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Skp2Q9Z0Z3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Skp2Q9Z0Z3 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Skp2Q9Z0Z3 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Skp2Q9Z0Z3 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Skp2Q9Z0Z3 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Skp2Q9Z0Z3 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Skp2Q9Z0Z3 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Skp2Q9Z0Z3 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Skp2Q9Z0Z3 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Skp2Q9Z0Z3 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Skp2Q9Z0Z3 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Skp2Q9Z0Z3 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Skp2Q9Z0Z3 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Skp2Q9Z0Z3 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Skp2Q9Z0Z3 Gm15165-201ENSMUST00000118140 502 ntBASIC13.82□□□□□ -0.2
Skp2Q9Z0Z3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.82□□□□□ -0.2
Skp2Q9Z0Z3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Skp2Q9Z0Z3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Skp2Q9Z0Z3 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Skp2Q9Z0Z3 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Skp2Q9Z0Z3 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Skp2Q9Z0Z3 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Skp2Q9Z0Z3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Skp2Q9Z0Z3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Skp2Q9Z0Z3 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.82□□□□□ -0.2
Skp2Q9Z0Z3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Skp2Q9Z0Z3 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Skp2Q9Z0Z3 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Skp2Q9Z0Z3 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Skp2Q9Z0Z3 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Skp2Q9Z0Z3 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Skp2Q9Z0Z3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Skp2Q9Z0Z3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Skp2Q9Z0Z3 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Skp2Q9Z0Z3 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Skp2Q9Z0Z3 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Skp2Q9Z0Z3 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.81□□□□□ -0.2
Skp2Q9Z0Z3 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Skp2Q9Z0Z3 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Skp2Q9Z0Z3 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Skp2Q9Z0Z3 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Skp2Q9Z0Z3 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.81□□□□□ -0.2
Skp2Q9Z0Z3 Gm25745-201ENSMUST00000174945 133 ntBASIC13.81□□□□□ -0.2
Skp2Q9Z0Z3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Skp2Q9Z0Z3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Skp2Q9Z0Z3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Skp2Q9Z0Z3 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Skp2Q9Z0Z3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.81□□□□□ -0.2
Skp2Q9Z0Z3 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.81□□□□□ -0.2
Skp2Q9Z0Z3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Skp2Q9Z0Z3 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Skp2Q9Z0Z3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Skp2Q9Z0Z3 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Skp2Q9Z0Z3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Skp2Q9Z0Z3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Skp2Q9Z0Z3 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Skp2Q9Z0Z3 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Skp2Q9Z0Z3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Skp2Q9Z0Z3 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Skp2Q9Z0Z3 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Skp2Q9Z0Z3 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Skp2Q9Z0Z3 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Skp2Q9Z0Z3 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Skp2Q9Z0Z3 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Skp2Q9Z0Z3 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Skp2Q9Z0Z3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Skp2Q9Z0Z3 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Skp2Q9Z0Z3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms