Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcb1Q9Z0H3 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.69■□□□□ 0.1
Smarcb1Q9Z0H3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcb1Q9Z0H3 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcb1Q9Z0H3 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.69■□□□□ 0.1
Smarcb1Q9Z0H3 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcb1Q9Z0H3 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcb1Q9Z0H3 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcb1Q9Z0H3 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcb1Q9Z0H3 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.69■□□□□ 0.1
Smarcb1Q9Z0H3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Smarcb1Q9Z0H3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcb1Q9Z0H3 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcb1Q9Z0H3 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcb1Q9Z0H3 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcb1Q9Z0H3 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcb1Q9Z0H3 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcb1Q9Z0H3 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm22065-201ENSMUST00000103753 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm22066-201ENSMUST00000103761 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm24932-201ENSMUST00000103763 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm24115-201ENSMUST00000103799 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm22190-201ENSMUST00000103827 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm22191-201ENSMUST00000103831 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm24721-201ENSMUST00000103849 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm28018-201ENSMUST00000103869 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm26399-201ENSMUST00000103937 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm25349-201ENSMUST00000177728 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm23616-201ENSMUST00000177797 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm25871-201ENSMUST00000177816 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm24752-201ENSMUST00000178240 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm24496-201ENSMUST00000178287 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm25649-201ENSMUST00000178476 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm25548-201ENSMUST00000178681 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm23147-201ENSMUST00000178841 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm26095-201ENSMUST00000179270 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm22171-201ENSMUST00000179283 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm23936-201ENSMUST00000179354 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm22619-201ENSMUST00000179516 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm25255-201ENSMUST00000179579 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm24755-201ENSMUST00000179691 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm26506-201ENSMUST00000179692 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm25086-201ENSMUST00000179931 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm23243-201ENSMUST00000180047 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm24659-201ENSMUST00000180212 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm24169-201ENSMUST00000180244 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm23689-201ENSMUST00000180354 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm27359-201ENSMUST00000184153 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm27785-201ENSMUST00000184268 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm27466-201ENSMUST00000184396 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm27703-201ENSMUST00000184836 110 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.68■□□□□ 0.1
Smarcb1Q9Z0H3 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
Smarcb1Q9Z0H3 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcb1Q9Z0H3 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcb1Q9Z0H3 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.67■□□□□ 0.1
Smarcb1Q9Z0H3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcb1Q9Z0H3 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Smarcb1Q9Z0H3 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcb1Q9Z0H3 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcb1Q9Z0H3 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms