Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm8825-201ENSMUST00000182565 998 ntBASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm4518-201ENSMUST00000182638 718 ntBASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cr1Q9Z0D9 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cr1Q9Z0D9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cr1Q9Z0D9 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.85□□□□□ -0.35
Cx3cr1Q9Z0D9 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.85□□□□□ -0.35
Cx3cr1Q9Z0D9 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cr1Q9Z0D9 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cr1Q9Z0D9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cr1Q9Z0D9 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.85□□□□□ -0.35
Cx3cr1Q9Z0D9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cr1Q9Z0D9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.85□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.85□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cx3cr1Q9Z0D9 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
Cx3cr1Q9Z0D9 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Cx3cr1Q9Z0D9 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cr1Q9Z0D9 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cx3cr1Q9Z0D9 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cr1Q9Z0D9 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cr1Q9Z0D9 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cr1Q9Z0D9 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cr1Q9Z0D9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cr1Q9Z0D9 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cr1Q9Z0D9 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cx3cr1Q9Z0D9 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cx3cr1Q9Z0D9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cx3cr1Q9Z0D9 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms