Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CcsQ9WU84 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CcsQ9WU84 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CcsQ9WU84 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC11.84□□□□□ -0.51
CcsQ9WU84 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CcsQ9WU84 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CcsQ9WU84 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC11.84□□□□□ -0.51
CcsQ9WU84 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CcsQ9WU84 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
CcsQ9WU84 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CcsQ9WU84 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CcsQ9WU84 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CcsQ9WU84 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.84□□□□□ -0.51
CcsQ9WU84 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CcsQ9WU84 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CcsQ9WU84 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.51
CcsQ9WU84 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.83□□□□□ -0.51
CcsQ9WU84 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
CcsQ9WU84 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CcsQ9WU84 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CcsQ9WU84 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
CcsQ9WU84 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CcsQ9WU84 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CcsQ9WU84 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CcsQ9WU84 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
CcsQ9WU84 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
CcsQ9WU84 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CcsQ9WU84 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CcsQ9WU84 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC11.83□□□□□ -0.52
CcsQ9WU84 Gm27000-201ENSMUST00000182943 842 ntBASIC11.83□□□□□ -0.52
CcsQ9WU84 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CcsQ9WU84 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
CcsQ9WU84 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CcsQ9WU84 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CcsQ9WU84 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
CcsQ9WU84 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CcsQ9WU84 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CcsQ9WU84 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CcsQ9WU84 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CcsQ9WU84 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CcsQ9WU84 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CcsQ9WU84 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CcsQ9WU84 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
CcsQ9WU84 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CcsQ9WU84 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CcsQ9WU84 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CcsQ9WU84 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CcsQ9WU84 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CcsQ9WU84 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CcsQ9WU84 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CcsQ9WU84 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
CcsQ9WU84 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CcsQ9WU84 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CcsQ9WU84 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CcsQ9WU84 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CcsQ9WU84 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CcsQ9WU84 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CcsQ9WU84 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CcsQ9WU84 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CcsQ9WU84 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
CcsQ9WU84 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CcsQ9WU84 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CcsQ9WU84 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CcsQ9WU84 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CcsQ9WU84 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CcsQ9WU84 Gm8258-201ENSMUST00000055593 1449 ntBASIC11.82□□□□□ -0.52
CcsQ9WU84 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CcsQ9WU84 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
CcsQ9WU84 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CcsQ9WU84 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CcsQ9WU84 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CcsQ9WU84 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.82□□□□□ -0.52
CcsQ9WU84 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CcsQ9WU84 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CcsQ9WU84 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CcsQ9WU84 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CcsQ9WU84 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CcsQ9WU84 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CcsQ9WU84 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CcsQ9WU84 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CcsQ9WU84 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CcsQ9WU84 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.81□□□□□ -0.52
CcsQ9WU84 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CcsQ9WU84 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CcsQ9WU84 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CcsQ9WU84 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
CcsQ9WU84 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CcsQ9WU84 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CcsQ9WU84 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC11.81□□□□□ -0.52
CcsQ9WU84 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC11.81□□□□□ -0.52
CcsQ9WU84 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CcsQ9WU84 AC122351.1-201ENSMUST00000220467 126 ntBASIC11.81□□□□□ -0.52
CcsQ9WU84 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CcsQ9WU84 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC11.81□□□□□ -0.52
CcsQ9WU84 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CcsQ9WU84 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CcsQ9WU84 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CcsQ9WU84 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CcsQ9WU84 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CcsQ9WU84 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms