Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nubp1Q9R060 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nubp1Q9R060 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nubp1Q9R060 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nubp1Q9R060 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nubp1Q9R060 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nubp1Q9R060 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nubp1Q9R060 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Nubp1Q9R060 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nubp1Q9R060 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nubp1Q9R060 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nubp1Q9R060 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nubp1Q9R060 Gm25287-201ENSMUST00000103846 110 ntBASIC13.36□□□□□ -0.27
Nubp1Q9R060 Gm22918-201ENSMUST00000103855 110 ntBASIC13.36□□□□□ -0.27
Nubp1Q9R060 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.36□□□□□ -0.27
Nubp1Q9R060 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.36□□□□□ -0.27
Nubp1Q9R060 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nubp1Q9R060 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.36□□□□□ -0.27
Nubp1Q9R060 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.36□□□□□ -0.27
Nubp1Q9R060 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.36□□□□□ -0.27
Nubp1Q9R060 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nubp1Q9R060 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nubp1Q9R060 Gm7774-201ENSMUST00000200064 533 ntBASIC13.36□□□□□ -0.27
Nubp1Q9R060 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.36□□□□□ -0.27
Nubp1Q9R060 Gm19164-201ENSMUST00000210667 640 ntBASIC13.36□□□□□ -0.27
Nubp1Q9R060 Thap2-203ENSMUST00000218989 527 ntBASIC13.36□□□□□ -0.27
Nubp1Q9R060 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.36□□□□□ -0.27
Nubp1Q9R060 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nubp1Q9R060 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nubp1Q9R060 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nubp1Q9R060 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nubp1Q9R060 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nubp1Q9R060 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nubp1Q9R060 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nubp1Q9R060 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nubp1Q9R060 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Nubp1Q9R060 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nubp1Q9R060 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.35□□□□□ -0.27
Nubp1Q9R060 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Nubp1Q9R060 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Nubp1Q9R060 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nubp1Q9R060 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nubp1Q9R060 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nubp1Q9R060 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nubp1Q9R060 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nubp1Q9R060 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Nubp1Q9R060 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Nubp1Q9R060 Gm13597-201ENSMUST00000121239 375 ntBASIC13.35□□□□□ -0.27
Nubp1Q9R060 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Nubp1Q9R060 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Nubp1Q9R060 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nubp1Q9R060 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nubp1Q9R060 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nubp1Q9R060 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nubp1Q9R060 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nubp1Q9R060 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nubp1Q9R060 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Nubp1Q9R060 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nubp1Q9R060 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nubp1Q9R060 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.35□□□□□ -0.27
Nubp1Q9R060 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nubp1Q9R060 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nubp1Q9R060 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nubp1Q9R060 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nubp1Q9R060 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nubp1Q9R060 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nubp1Q9R060 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nubp1Q9R060 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nubp1Q9R060 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nubp1Q9R060 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nubp1Q9R060 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.35□□□□□ -0.27
Nubp1Q9R060 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nubp1Q9R060 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Nubp1Q9R060 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Gm42535-201ENSMUST00000197312 1399 ntBASIC13.34□□□□□ -0.27
Nubp1Q9R060 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nubp1Q9R060 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.34□□□□□ -0.27
Nubp1Q9R060 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Prob1-201ENSMUST00000097619 3021 ntBASIC13.34□□□□□ -0.27
Nubp1Q9R060 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.34□□□□□ -0.27
Nubp1Q9R060 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Gm24158-201ENSMUST00000175263 71 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms