Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps29Q9QZ88 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps29Q9QZ88 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vps29Q9QZ88 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps29Q9QZ88 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps29Q9QZ88 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps29Q9QZ88 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps29Q9QZ88 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps29Q9QZ88 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps29Q9QZ88 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps29Q9QZ88 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.54□□□□□ -0.08
Vps29Q9QZ88 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps29Q9QZ88 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.54□□□□□ -0.08
Vps29Q9QZ88 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps29Q9QZ88 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.54□□□□□ -0.08
Vps29Q9QZ88 Gm6089-201ENSMUST00000197666 938 ntBASIC14.54□□□□□ -0.08
Vps29Q9QZ88 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.54□□□□□ -0.08
Vps29Q9QZ88 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.54□□□□□ -0.08
Vps29Q9QZ88 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps29Q9QZ88 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps29Q9QZ88 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps29Q9QZ88 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.54□□□□□ -0.08
Vps29Q9QZ88 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps29Q9QZ88 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps29Q9QZ88 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps29Q9QZ88 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps29Q9QZ88 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps29Q9QZ88 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps29Q9QZ88 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps29Q9QZ88 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps29Q9QZ88 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps29Q9QZ88 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps29Q9QZ88 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps29Q9QZ88 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps29Q9QZ88 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps29Q9QZ88 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.53□□□□□ -0.08
Vps29Q9QZ88 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps29Q9QZ88 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps29Q9QZ88 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps29Q9QZ88 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps29Q9QZ88 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps29Q9QZ88 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vps29Q9QZ88 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Vps29Q9QZ88 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps29Q9QZ88 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps29Q9QZ88 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps29Q9QZ88 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vps29Q9QZ88 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps29Q9QZ88 Gm25990-201ENSMUST00000102440 86 ntBASIC14.53□□□□□ -0.08
Vps29Q9QZ88 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.53□□□□□ -0.08
Vps29Q9QZ88 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.53□□□□□ -0.08
Vps29Q9QZ88 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.53□□□□□ -0.08
Vps29Q9QZ88 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.53□□□□□ -0.08
Vps29Q9QZ88 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps29Q9QZ88 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps29Q9QZ88 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps29Q9QZ88 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.53□□□□□ -0.08
Vps29Q9QZ88 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps29Q9QZ88 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps29Q9QZ88 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps29Q9QZ88 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps29Q9QZ88 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps29Q9QZ88 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps29Q9QZ88 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Vps29Q9QZ88 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps29Q9QZ88 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Vps29Q9QZ88 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps29Q9QZ88 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.52□□□□□ -0.08
Vps29Q9QZ88 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps29Q9QZ88 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps29Q9QZ88 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps29Q9QZ88 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Vps29Q9QZ88 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps29Q9QZ88 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.52□□□□□ -0.08
Vps29Q9QZ88 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps29Q9QZ88 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps29Q9QZ88 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps29Q9QZ88 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vps29Q9QZ88 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.52□□□□□ -0.09
Vps29Q9QZ88 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.52□□□□□ -0.09
Vps29Q9QZ88 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.52□□□□□ -0.09
Vps29Q9QZ88 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps29Q9QZ88 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps29Q9QZ88 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.52□□□□□ -0.09
Vps29Q9QZ88 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.52□□□□□ -0.09
Vps29Q9QZ88 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.52□□□□□ -0.09
Vps29Q9QZ88 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps29Q9QZ88 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps29Q9QZ88 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps29Q9QZ88 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps29Q9QZ88 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps29Q9QZ88 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps29Q9QZ88 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps29Q9QZ88 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps29Q9QZ88 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vps29Q9QZ88 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Vps29Q9QZ88 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps29Q9QZ88 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vps29Q9QZ88 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vps29Q9QZ88 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms