Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trem1Q9JKE2 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.63□□□□□ -0.23
Trem1Q9JKE2 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trem1Q9JKE2 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trem1Q9JKE2 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trem1Q9JKE2 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trem1Q9JKE2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.63□□□□□ -0.23
Trem1Q9JKE2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC13.63□□□□□ -0.23
Trem1Q9JKE2 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trem1Q9JKE2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trem1Q9JKE2 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trem1Q9JKE2 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trem1Q9JKE2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Trem1Q9JKE2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trem1Q9JKE2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trem1Q9JKE2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.63□□□□□ -0.23
Trem1Q9JKE2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trem1Q9JKE2 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trem1Q9JKE2 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trem1Q9JKE2 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Trem1Q9JKE2 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.63□□□□□ -0.23
Trem1Q9JKE2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.63□□□□□ -0.23
Trem1Q9JKE2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trem1Q9JKE2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trem1Q9JKE2 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trem1Q9JKE2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Trem1Q9JKE2 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trem1Q9JKE2 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trem1Q9JKE2 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trem1Q9JKE2 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trem1Q9JKE2 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trem1Q9JKE2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trem1Q9JKE2 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Trem1Q9JKE2 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trem1Q9JKE2 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trem1Q9JKE2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trem1Q9JKE2 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trem1Q9JKE2 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trem1Q9JKE2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.62□□□□□ -0.23
Trem1Q9JKE2 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trem1Q9JKE2 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trem1Q9JKE2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trem1Q9JKE2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trem1Q9JKE2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trem1Q9JKE2 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trem1Q9JKE2 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trem1Q9JKE2 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trem1Q9JKE2 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trem1Q9JKE2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
Trem1Q9JKE2 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trem1Q9JKE2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trem1Q9JKE2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trem1Q9JKE2 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trem1Q9JKE2 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.61□□□□□ -0.23
Trem1Q9JKE2 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trem1Q9JKE2 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trem1Q9JKE2 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trem1Q9JKE2 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trem1Q9JKE2 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trem1Q9JKE2 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trem1Q9JKE2 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trem1Q9JKE2 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trem1Q9JKE2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trem1Q9JKE2 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trem1Q9JKE2 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trem1Q9JKE2 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
Trem1Q9JKE2 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trem1Q9JKE2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trem1Q9JKE2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.61□□□□□ -0.23
Trem1Q9JKE2 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.61□□□□□ -0.23
Trem1Q9JKE2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trem1Q9JKE2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trem1Q9JKE2 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trem1Q9JKE2 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.61□□□□□ -0.23
Trem1Q9JKE2 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trem1Q9JKE2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trem1Q9JKE2 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trem1Q9JKE2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.61□□□□□ -0.23
Trem1Q9JKE2 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trem1Q9JKE2 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.6□□□□□ -0.23
Trem1Q9JKE2 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trem1Q9JKE2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trem1Q9JKE2 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trem1Q9JKE2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trem1Q9JKE2 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trem1Q9JKE2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trem1Q9JKE2 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trem1Q9JKE2 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.6□□□□□ -0.23
Trem1Q9JKE2 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trem1Q9JKE2 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trem1Q9JKE2 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trem1Q9JKE2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.6□□□□□ -0.23
Trem1Q9JKE2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.6□□□□□ -0.23
Trem1Q9JKE2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trem1Q9JKE2 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.6□□□□□ -0.23
Trem1Q9JKE2 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.6□□□□□ -0.23
Trem1Q9JKE2 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms