Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Gm15847-201ENSMUST00000121417 1065 ntBASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Gm21168-201ENSMUST00000199646 1096 ntBASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Mtag2-201ENSMUST00000058665 714 ntBASIC12.22□□□□□ -0.45
Smco4Q9JIS3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smco4Q9JIS3 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smco4Q9JIS3 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smco4Q9JIS3 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.21□□□□□ -0.45
Smco4Q9JIS3 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
Smco4Q9JIS3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smco4Q9JIS3 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Smco4Q9JIS3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC12.21□□□□□ -0.45
Smco4Q9JIS3 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smco4Q9JIS3 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smco4Q9JIS3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smco4Q9JIS3 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smco4Q9JIS3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smco4Q9JIS3 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smco4Q9JIS3 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Smco4Q9JIS3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Smco4Q9JIS3 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smco4Q9JIS3 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.21□□□□□ -0.45
Smco4Q9JIS3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smco4Q9JIS3 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smco4Q9JIS3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smco4Q9JIS3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC12.21□□□□□ -0.45
Smco4Q9JIS3 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Smco4Q9JIS3 Gm6365-201ENSMUST00000054711 744 ntBASIC12.21□□□□□ -0.45
Smco4Q9JIS3 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smco4Q9JIS3 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smco4Q9JIS3 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smco4Q9JIS3 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smco4Q9JIS3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smco4Q9JIS3 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smco4Q9JIS3 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smco4Q9JIS3 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smco4Q9JIS3 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.46
Smco4Q9JIS3 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Smco4Q9JIS3 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.46
Smco4Q9JIS3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smco4Q9JIS3 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Smco4Q9JIS3 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.21□□□□□ -0.46
Smco4Q9JIS3 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Smco4Q9JIS3 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smco4Q9JIS3 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.21□□□□□ -0.46
Smco4Q9JIS3 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smco4Q9JIS3 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Smco4Q9JIS3 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smco4Q9JIS3 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco4Q9JIS3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco4Q9JIS3 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Smco4Q9JIS3 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco4Q9JIS3 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco4Q9JIS3 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Smco4Q9JIS3 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.2□□□□□ -0.46
Smco4Q9JIS3 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco4Q9JIS3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smco4Q9JIS3 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco4Q9JIS3 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco4Q9JIS3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco4Q9JIS3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.2□□□□□ -0.46
Smco4Q9JIS3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco4Q9JIS3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Smco4Q9JIS3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco4Q9JIS3 Gm15375-201ENSMUST00000119510 849 ntBASIC12.2□□□□□ -0.46
Smco4Q9JIS3 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.2□□□□□ -0.46
Smco4Q9JIS3 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.2□□□□□ -0.46
Smco4Q9JIS3 Gm4974-201ENSMUST00000209974 875 ntBASIC12.2□□□□□ -0.46
Smco4Q9JIS3 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Smco4Q9JIS3 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco4Q9JIS3 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Smco4Q9JIS3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco4Q9JIS3 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms