Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ube4bQ9ES00 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.62□□□□□ -0.07
Ube4bQ9ES00 Gm13474-201ENSMUST00000122466 815 ntBASIC14.62□□□□□ -0.07
Ube4bQ9ES00 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4bQ9ES00 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.62□□□□□ -0.07
Ube4bQ9ES00 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.62□□□□□ -0.07
Ube4bQ9ES00 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.62□□□□□ -0.07
Ube4bQ9ES00 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.62□□□□□ -0.07
Ube4bQ9ES00 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.62□□□□□ -0.07
Ube4bQ9ES00 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4bQ9ES00 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4bQ9ES00 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4bQ9ES00 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4bQ9ES00 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4bQ9ES00 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4bQ9ES00 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ube4bQ9ES00 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ube4bQ9ES00 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4bQ9ES00 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4bQ9ES00 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ube4bQ9ES00 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4bQ9ES00 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4bQ9ES00 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4bQ9ES00 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4bQ9ES00 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4bQ9ES00 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4bQ9ES00 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.61□□□□□ -0.07
Ube4bQ9ES00 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ube4bQ9ES00 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4bQ9ES00 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Ube4bQ9ES00 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.61□□□□□ -0.07
Ube4bQ9ES00 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.61□□□□□ -0.07
Ube4bQ9ES00 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4bQ9ES00 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4bQ9ES00 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4bQ9ES00 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Ube4bQ9ES00 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4bQ9ES00 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.61□□□□□ -0.07
Ube4bQ9ES00 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4bQ9ES00 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4bQ9ES00 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4bQ9ES00 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4bQ9ES00 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4bQ9ES00 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4bQ9ES00 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4bQ9ES00 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ube4bQ9ES00 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Ube4bQ9ES00 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4bQ9ES00 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4bQ9ES00 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4bQ9ES00 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Gm11539-201ENSMUST00000119837 557 ntBASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Gm16061-201ENSMUST00000122167 857 ntBASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ube4bQ9ES00 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4bQ9ES00 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4bQ9ES00 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.59□□□□□ -0.07
Ube4bQ9ES00 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4bQ9ES00 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4bQ9ES00 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.59□□□□□ -0.07
Ube4bQ9ES00 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4bQ9ES00 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Ube4bQ9ES00 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4bQ9ES00 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4bQ9ES00 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4bQ9ES00 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4bQ9ES00 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4bQ9ES00 Gm13186-201ENSMUST00000118031 316 ntBASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms