Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a3bpQ9EQG9 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a3bpQ9EQG9 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a3bpQ9EQG9 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a3bpQ9EQG9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a3bpQ9EQG9 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.39■□□□□ 0.37
Col4a3bpQ9EQG9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a3bpQ9EQG9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a3bpQ9EQG9 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a3bpQ9EQG9 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Col4a3bpQ9EQG9 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a3bpQ9EQG9 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Col4a3bpQ9EQG9 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a3bpQ9EQG9 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a3bpQ9EQG9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a3bpQ9EQG9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a3bpQ9EQG9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a3bpQ9EQG9 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a3bpQ9EQG9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a3bpQ9EQG9 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a3bpQ9EQG9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Col4a3bpQ9EQG9 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a3bpQ9EQG9 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a3bpQ9EQG9 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
Col4a3bpQ9EQG9 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.38■□□□□ 0.37
Col4a3bpQ9EQG9 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a3bpQ9EQG9 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a3bpQ9EQG9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a3bpQ9EQG9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a3bpQ9EQG9 Gm11780-201ENSMUST00000136880 516 ntBASIC17.38■□□□□ 0.37
Col4a3bpQ9EQG9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a3bpQ9EQG9 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a3bpQ9EQG9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a3bpQ9EQG9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a3bpQ9EQG9 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.38■□□□□ 0.37
Col4a3bpQ9EQG9 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a3bpQ9EQG9 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a3bpQ9EQG9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a3bpQ9EQG9 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.38■□□□□ 0.37
Col4a3bpQ9EQG9 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a3bpQ9EQG9 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.37■□□□□ 0.37
Col4a3bpQ9EQG9 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a3bpQ9EQG9 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a3bpQ9EQG9 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a3bpQ9EQG9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a3bpQ9EQG9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a3bpQ9EQG9 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a3bpQ9EQG9 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a3bpQ9EQG9 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a3bpQ9EQG9 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a3bpQ9EQG9 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Col4a3bpQ9EQG9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.37■□□□□ 0.37
Col4a3bpQ9EQG9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a3bpQ9EQG9 Gm7230-201ENSMUST00000173026 815 ntBASIC17.37■□□□□ 0.37
Col4a3bpQ9EQG9 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a3bpQ9EQG9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.37■□□□□ 0.37
Col4a3bpQ9EQG9 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.37■□□□□ 0.37
Col4a3bpQ9EQG9 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a3bpQ9EQG9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a3bpQ9EQG9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Col4a3bpQ9EQG9 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.37■□□□□ 0.37
Col4a3bpQ9EQG9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Col4a3bpQ9EQG9 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a3bpQ9EQG9 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a3bpQ9EQG9 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a3bpQ9EQG9 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.37■□□□□ 0.37
Col4a3bpQ9EQG9 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a3bpQ9EQG9 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a3bpQ9EQG9 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a3bpQ9EQG9 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a3bpQ9EQG9 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Col4a3bpQ9EQG9 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Col4a3bpQ9EQG9 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Col4a3bpQ9EQG9 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.36■□□□□ 0.37
Col4a3bpQ9EQG9 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a3bpQ9EQG9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.36■□□□□ 0.37
Col4a3bpQ9EQG9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a3bpQ9EQG9 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Col4a3bpQ9EQG9 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.36■□□□□ 0.37
Col4a3bpQ9EQG9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.36■□□□□ 0.37
Col4a3bpQ9EQG9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a3bpQ9EQG9 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Col4a3bpQ9EQG9 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.36■□□□□ 0.37
Col4a3bpQ9EQG9 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.36■□□□□ 0.37
Col4a3bpQ9EQG9 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.36■□□□□ 0.37
Col4a3bpQ9EQG9 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.36■□□□□ 0.37
Col4a3bpQ9EQG9 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.36■□□□□ 0.37
Col4a3bpQ9EQG9 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a3bpQ9EQG9 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a3bpQ9EQG9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a3bpQ9EQG9 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a3bpQ9EQG9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a3bpQ9EQG9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a3bpQ9EQG9 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a3bpQ9EQG9 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a3bpQ9EQG9 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Col4a3bpQ9EQG9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a3bpQ9EQG9 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a3bpQ9EQG9 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a3bpQ9EQG9 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms