Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cpsf1Q9EPU4 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cpsf1Q9EPU4 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Cpsf1Q9EPU4 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Cpsf1Q9EPU4 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC20.77■□□□□ 0.91
Cpsf1Q9EPU4 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC20.77■□□□□ 0.91
Cpsf1Q9EPU4 AC124732.2-201ENSMUST00000221977 316 ntBASIC20.77■□□□□ 0.91
Cpsf1Q9EPU4 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Cpsf1Q9EPU4 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Cpsf1Q9EPU4 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Cpsf1Q9EPU4 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpsf1Q9EPU4 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpsf1Q9EPU4 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpsf1Q9EPU4 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpsf1Q9EPU4 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpsf1Q9EPU4 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Cpsf1Q9EPU4 Gm20949-201ENSMUST00000206478 952 ntBASIC20.76■□□□□ 0.91
Cpsf1Q9EPU4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf1Q9EPU4 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf1Q9EPU4 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf1Q9EPU4 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf1Q9EPU4 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf1Q9EPU4 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Cpsf1Q9EPU4 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf1Q9EPU4 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf1Q9EPU4 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf1Q9EPU4 Gm43352-201ENSMUST00000196419 3065 ntBASIC20.75■□□□□ 0.91
Cpsf1Q9EPU4 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf1Q9EPU4 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC20.75■□□□□ 0.91
Cpsf1Q9EPU4 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf1Q9EPU4 Gm27622-201ENSMUST00000183779 60 ntBASIC20.75■□□□□ 0.91
Cpsf1Q9EPU4 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf1Q9EPU4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
Cpsf1Q9EPU4 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf1Q9EPU4 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Cpsf1Q9EPU4 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf1Q9EPU4 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf1Q9EPU4 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf1Q9EPU4 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC20.74■□□□□ 0.91
Cpsf1Q9EPU4 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Cpsf1Q9EPU4 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf1Q9EPU4 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf1Q9EPU4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf1Q9EPU4 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Cpsf1Q9EPU4 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf1Q9EPU4 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
Cpsf1Q9EPU4 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf1Q9EPU4 Gm24158-201ENSMUST00000175263 71 ntBASIC20.74■□□□□ 0.91
Cpsf1Q9EPU4 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf1Q9EPU4 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC20.74■□□□□ 0.91
Cpsf1Q9EPU4 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf1Q9EPU4 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf1Q9EPU4 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Cpsf1Q9EPU4 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Cpsf1Q9EPU4 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf1Q9EPU4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf1Q9EPU4 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf1Q9EPU4 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf1Q9EPU4 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Cpsf1Q9EPU4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Cpsf1Q9EPU4 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Cpsf1Q9EPU4 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC20.73■□□□□ 0.91
Cpsf1Q9EPU4 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf1Q9EPU4 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf1Q9EPU4 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf1Q9EPU4 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf1Q9EPU4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Cpsf1Q9EPU4 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Cpsf1Q9EPU4 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC20.73■□□□□ 0.91
Cpsf1Q9EPU4 Gm13223-201ENSMUST00000118609 747 ntBASIC20.73■□□□□ 0.91
Cpsf1Q9EPU4 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC20.73■□□□□ 0.91
Cpsf1Q9EPU4 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC20.73■□□□□ 0.91
Cpsf1Q9EPU4 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf1Q9EPU4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Cpsf1Q9EPU4 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf1Q9EPU4 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf1Q9EPU4 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC20.73■□□□□ 0.91
Cpsf1Q9EPU4 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf1Q9EPU4 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf1Q9EPU4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf1Q9EPU4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf1Q9EPU4 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf1Q9EPU4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf1Q9EPU4 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf1Q9EPU4 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf1Q9EPU4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf1Q9EPU4 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf1Q9EPU4 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf1Q9EPU4 Gm9824-201ENSMUST00000178707 561 ntBASIC20.72■□□□□ 0.91
Cpsf1Q9EPU4 Gm6944-201ENSMUST00000182449 1006 ntBASIC20.72■□□□□ 0.91
Cpsf1Q9EPU4 Gm37230-201ENSMUST00000194491 818 ntBASIC20.72■□□□□ 0.91
Cpsf1Q9EPU4 Gm5779-201ENSMUST00000218467 910 ntBASIC20.72■□□□□ 0.91
Cpsf1Q9EPU4 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf1Q9EPU4 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf1Q9EPU4 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf1Q9EPU4 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf1Q9EPU4 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Cpsf1Q9EPU4 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf1Q9EPU4 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf1Q9EPU4 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms