Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.28□□□□□ -0.12
Hmgn3Q9DCB1 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.28□□□□□ -0.12
Hmgn3Q9DCB1 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgn3Q9DCB1 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgn3Q9DCB1 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgn3Q9DCB1 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgn3Q9DCB1 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgn3Q9DCB1 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgn3Q9DCB1 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgn3Q9DCB1 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgn3Q9DCB1 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgn3Q9DCB1 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgn3Q9DCB1 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgn3Q9DCB1 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
Hmgn3Q9DCB1 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.27□□□□□ -0.12
Hmgn3Q9DCB1 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgn3Q9DCB1 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgn3Q9DCB1 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgn3Q9DCB1 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgn3Q9DCB1 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgn3Q9DCB1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgn3Q9DCB1 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgn3Q9DCB1 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgn3Q9DCB1 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgn3Q9DCB1 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmgn3Q9DCB1 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.27□□□□□ -0.13
Hmgn3Q9DCB1 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgn3Q9DCB1 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Hmgn3Q9DCB1 Gm37055-201ENSMUST00000191866 133 ntBASIC14.27□□□□□ -0.13
Hmgn3Q9DCB1 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.27□□□□□ -0.13
Hmgn3Q9DCB1 Gm30025-201ENSMUST00000218555 728 ntBASIC14.27□□□□□ -0.13
Hmgn3Q9DCB1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgn3Q9DCB1 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgn3Q9DCB1 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgn3Q9DCB1 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgn3Q9DCB1 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgn3Q9DCB1 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgn3Q9DCB1 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgn3Q9DCB1 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Hmgn3Q9DCB1 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgn3Q9DCB1 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Hmgn3Q9DCB1 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Hmgn3Q9DCB1 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmgn3Q9DCB1 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.27□□□□□ -0.13
Hmgn3Q9DCB1 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgn3Q9DCB1 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgn3Q9DCB1 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgn3Q9DCB1 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgn3Q9DCB1 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgn3Q9DCB1 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgn3Q9DCB1 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgn3Q9DCB1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgn3Q9DCB1 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgn3Q9DCB1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgn3Q9DCB1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Hmgn3Q9DCB1 Gm7370-201ENSMUST00000219471 767 ntBASIC14.26□□□□□ -0.13
Hmgn3Q9DCB1 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgn3Q9DCB1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Hmgn3Q9DCB1 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Hmgn3Q9DCB1 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Hmgn3Q9DCB1 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
Hmgn3Q9DCB1 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgn3Q9DCB1 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgn3Q9DCB1 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgn3Q9DCB1 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hmgn3Q9DCB1 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.26□□□□□ -0.13
Hmgn3Q9DCB1 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgn3Q9DCB1 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Hmgn3Q9DCB1 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgn3Q9DCB1 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.26□□□□□ -0.13
Hmgn3Q9DCB1 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgn3Q9DCB1 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgn3Q9DCB1 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgn3Q9DCB1 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Hmgn3Q9DCB1 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Hmgn3Q9DCB1 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgn3Q9DCB1 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgn3Q9DCB1 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgn3Q9DCB1 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgn3Q9DCB1 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgn3Q9DCB1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgn3Q9DCB1 Gm44430-201ENSMUST00000203376 995 ntBASIC14.25□□□□□ -0.13
Hmgn3Q9DCB1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgn3Q9DCB1 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Hmgn3Q9DCB1 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgn3Q9DCB1 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgn3Q9DCB1 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgn3Q9DCB1 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgn3Q9DCB1 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgn3Q9DCB1 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgn3Q9DCB1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgn3Q9DCB1 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgn3Q9DCB1 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgn3Q9DCB1 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgn3Q9DCB1 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn3Q9DCB1 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.24□□□□□ -0.13
Hmgn3Q9DCB1 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Hmgn3Q9DCB1 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn3Q9DCB1 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn3Q9DCB1 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms