Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rrp8Q9DB85 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rrp8Q9DB85 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rrp8Q9DB85 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rrp8Q9DB85 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Rrp8Q9DB85 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rrp8Q9DB85 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Rrp8Q9DB85 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.83□□□□□ -0.04
Rrp8Q9DB85 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rrp8Q9DB85 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Rrp8Q9DB85 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rrp8Q9DB85 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Rrp8Q9DB85 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Rrp8Q9DB85 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Rrp8Q9DB85 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.83□□□□□ -0.04
Rrp8Q9DB85 Gm2810-201ENSMUST00000118681 990 ntBASIC14.83□□□□□ -0.04
Rrp8Q9DB85 Gm16026-204ENSMUST00000162652 683 ntBASIC14.83□□□□□ -0.04
Rrp8Q9DB85 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Rrp8Q9DB85 Gm17837-201ENSMUST00000186435 985 ntBASIC14.83□□□□□ -0.04
Rrp8Q9DB85 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.83□□□□□ -0.04
Rrp8Q9DB85 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.83□□□□□ -0.04
Rrp8Q9DB85 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.04
Rrp8Q9DB85 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rrp8Q9DB85 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rrp8Q9DB85 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rrp8Q9DB85 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rrp8Q9DB85 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rrp8Q9DB85 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rrp8Q9DB85 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Rrp8Q9DB85 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rrp8Q9DB85 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Rrp8Q9DB85 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.83□□□□□ -0.04
Rrp8Q9DB85 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp8Q9DB85 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp8Q9DB85 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp8Q9DB85 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp8Q9DB85 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp8Q9DB85 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Rrp8Q9DB85 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Rrp8Q9DB85 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp8Q9DB85 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp8Q9DB85 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp8Q9DB85 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp8Q9DB85 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.82□□□□□ -0.04
Rrp8Q9DB85 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp8Q9DB85 Gm8410-201ENSMUST00000117225 605 ntBASIC14.82□□□□□ -0.04
Rrp8Q9DB85 Gm6415-201ENSMUST00000118488 348 ntBASIC14.82□□□□□ -0.04
Rrp8Q9DB85 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp8Q9DB85 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.82□□□□□ -0.04
Rrp8Q9DB85 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp8Q9DB85 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp8Q9DB85 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.82□□□□□ -0.04
Rrp8Q9DB85 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp8Q9DB85 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp8Q9DB85 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp8Q9DB85 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp8Q9DB85 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp8Q9DB85 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp8Q9DB85 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp8Q9DB85 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp8Q9DB85 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Rrp8Q9DB85 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp8Q9DB85 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.82□□□□□ -0.04
Rrp8Q9DB85 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rrp8Q9DB85 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rrp8Q9DB85 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Rrp8Q9DB85 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rrp8Q9DB85 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rrp8Q9DB85 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.81□□□□□ -0.04
Rrp8Q9DB85 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Rrp8Q9DB85 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Rrp8Q9DB85 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.81□□□□□ -0.04
Rrp8Q9DB85 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rrp8Q9DB85 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rrp8Q9DB85 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.81□□□□□ -0.04
Rrp8Q9DB85 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rrp8Q9DB85 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rrp8Q9DB85 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rrp8Q9DB85 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rrp8Q9DB85 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rrp8Q9DB85 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Gm15693-201ENSMUST00000120470 637 ntBASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Gm23547-201ENSMUST00000158210 271 ntBASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Gm27437-201ENSMUST00000183429 107 ntBASIC14.8□□□□□ -0.04
Rrp8Q9DB85 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms