Protein–RNA interactions for Protein: Q9DA73

Ccdc89, Coiled-coil domain-containing protein 89, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc89Q9DA73 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc89Q9DA73 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc89Q9DA73 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc89Q9DA73 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc89Q9DA73 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc89Q9DA73 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Ccdc89Q9DA73 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 Gm34391-201ENSMUST00000203706 907 ntBASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 Birc2-201ENSMUST00000054878 378 ntBASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc89Q9DA73 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc89Q9DA73 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ccdc89Q9DA73 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc89Q9DA73 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc89Q9DA73 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc89Q9DA73 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc89Q9DA73 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc89Q9DA73 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc89Q9DA73 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.63■□□□□ 0.25
Ccdc89Q9DA73 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Ccdc89Q9DA73 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc89Q9DA73 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ccdc89Q9DA73 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.63■□□□□ 0.25
Ccdc89Q9DA73 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.63■□□□□ 0.25
Ccdc89Q9DA73 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc89Q9DA73 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc89Q9DA73 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc89Q9DA73 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc89Q9DA73 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc89Q9DA73 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc89Q9DA73 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Ccdc89Q9DA73 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc89Q9DA73 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc89Q9DA73 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc89Q9DA73 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc89Q9DA73 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc89Q9DA73 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc89Q9DA73 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc89Q9DA73 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.62■□□□□ 0.25
Ccdc89Q9DA73 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc89Q9DA73 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc89Q9DA73 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc89Q9DA73 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.62■□□□□ 0.25
Ccdc89Q9DA73 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccdc89Q9DA73 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc89Q9DA73 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccdc89Q9DA73 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc89Q9DA73 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ccdc89Q9DA73 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.62■□□□□ 0.25
Ccdc89Q9DA73 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.62■□□□□ 0.25
Ccdc89Q9DA73 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc89Q9DA73 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc89Q9DA73 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc89Q9DA73 Gm27459-201ENSMUST00000184860 107 ntBASIC16.62■□□□□ 0.25
Ccdc89Q9DA73 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.62■□□□□ 0.25
Ccdc89Q9DA73 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.62■□□□□ 0.25
Ccdc89Q9DA73 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc89Q9DA73 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccdc89Q9DA73 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc89Q9DA73 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc89Q9DA73 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccdc89Q9DA73 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ccdc89Q9DA73 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc89Q9DA73 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc89Q9DA73 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc89Q9DA73 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc89Q9DA73 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.62■□□□□ 0.25
Ccdc89Q9DA73 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc89Q9DA73 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms