Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssmem1Q9D9Y8 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ssmem1Q9D9Y8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssmem1Q9D9Y8 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.12□□□□□ -0.31
Ssmem1Q9D9Y8 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.12□□□□□ -0.31
Ssmem1Q9D9Y8 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssmem1Q9D9Y8 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ssmem1Q9D9Y8 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssmem1Q9D9Y8 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssmem1Q9D9Y8 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssmem1Q9D9Y8 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssmem1Q9D9Y8 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssmem1Q9D9Y8 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssmem1Q9D9Y8 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.12□□□□□ -0.31
Ssmem1Q9D9Y8 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssmem1Q9D9Y8 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ssmem1Q9D9Y8 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ssmem1Q9D9Y8 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ssmem1Q9D9Y8 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ssmem1Q9D9Y8 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ssmem1Q9D9Y8 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ssmem1Q9D9Y8 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Ssmem1Q9D9Y8 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ssmem1Q9D9Y8 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Ssmem1Q9D9Y8 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.1□□□□□ -0.31
Ssmem1Q9D9Y8 Gm14494-201ENSMUST00000118786 435 ntBASIC13.1□□□□□ -0.31
Ssmem1Q9D9Y8 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.1□□□□□ -0.31
Ssmem1Q9D9Y8 Mir3113-201ENSMUST00000175478 76 ntBASIC13.1□□□□□ -0.31
Ssmem1Q9D9Y8 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.1□□□□□ -0.31
Ssmem1Q9D9Y8 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ssmem1Q9D9Y8 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ssmem1Q9D9Y8 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ssmem1Q9D9Y8 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ssmem1Q9D9Y8 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ssmem1Q9D9Y8 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ssmem1Q9D9Y8 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ssmem1Q9D9Y8 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ssmem1Q9D9Y8 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ssmem1Q9D9Y8 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ssmem1Q9D9Y8 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ssmem1Q9D9Y8 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ssmem1Q9D9Y8 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ssmem1Q9D9Y8 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ssmem1Q9D9Y8 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms