Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
U2af1Q9D883 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
U2af1Q9D883 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
U2af1Q9D883 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
U2af1Q9D883 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
U2af1Q9D883 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
U2af1Q9D883 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
U2af1Q9D883 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
U2af1Q9D883 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
U2af1Q9D883 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC19.93■□□□□ 0.78
U2af1Q9D883 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
U2af1Q9D883 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
U2af1Q9D883 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
U2af1Q9D883 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
U2af1Q9D883 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
U2af1Q9D883 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
U2af1Q9D883 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
U2af1Q9D883 Gm6736-201ENSMUST00000166583 948 ntBASIC19.92■□□□□ 0.78
U2af1Q9D883 Gm43575-201ENSMUST00000196420 516 ntBASIC19.92■□□□□ 0.78
U2af1Q9D883 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
U2af1Q9D883 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
U2af1Q9D883 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
U2af1Q9D883 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
U2af1Q9D883 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC19.92■□□□□ 0.78
U2af1Q9D883 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC19.92■□□□□ 0.78
U2af1Q9D883 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
U2af1Q9D883 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
U2af1Q9D883 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
U2af1Q9D883 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
U2af1Q9D883 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
U2af1Q9D883 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2af1Q9D883 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2af1Q9D883 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2af1Q9D883 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2af1Q9D883 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
U2af1Q9D883 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2af1Q9D883 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2af1Q9D883 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2af1Q9D883 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC19.91■□□□□ 0.78
U2af1Q9D883 Gm15427-201ENSMUST00000117288 531 ntBASIC19.91■□□□□ 0.78
U2af1Q9D883 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2af1Q9D883 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC19.91■□□□□ 0.78
U2af1Q9D883 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC19.91■□□□□ 0.78
U2af1Q9D883 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2af1Q9D883 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC19.91■□□□□ 0.78
U2af1Q9D883 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2af1Q9D883 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
U2af1Q9D883 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
U2af1Q9D883 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2af1Q9D883 Gm5049-201ENSMUST00000195878 1590 ntBASIC19.91■□□□□ 0.78
U2af1Q9D883 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2af1Q9D883 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
U2af1Q9D883 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC19.91■□□□□ 0.78
U2af1Q9D883 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2af1Q9D883 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2af1Q9D883 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
U2af1Q9D883 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2af1Q9D883 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2af1Q9D883 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
U2af1Q9D883 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2af1Q9D883 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
U2af1Q9D883 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2af1Q9D883 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2af1Q9D883 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2af1Q9D883 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
U2af1Q9D883 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2af1Q9D883 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
U2af1Q9D883 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC19.9■□□□□ 0.78
U2af1Q9D883 Gm6226-201ENSMUST00000117765 1146 ntBASIC19.9■□□□□ 0.78
U2af1Q9D883 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2af1Q9D883 Gm2272-201ENSMUST00000194903 582 ntBASIC19.9■□□□□ 0.78
U2af1Q9D883 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2af1Q9D883 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2af1Q9D883 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
U2af1Q9D883 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.9■□□□□ 0.78
U2af1Q9D883 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2af1Q9D883 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC19.9■□□□□ 0.78
U2af1Q9D883 Celf4-206ENSMUST00000224553 1729 ntBASIC19.9■□□□□ 0.78
U2af1Q9D883 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2af1Q9D883 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2af1Q9D883 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2af1Q9D883 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
U2af1Q9D883 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2af1Q9D883 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2af1Q9D883 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
U2af1Q9D883 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
U2af1Q9D883 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC19.89■□□□□ 0.78
U2af1Q9D883 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
U2af1Q9D883 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC19.89■□□□□ 0.77
U2af1Q9D883 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
U2af1Q9D883 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC19.89■□□□□ 0.77
U2af1Q9D883 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC19.89■□□□□ 0.77
U2af1Q9D883 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
U2af1Q9D883 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC19.89■□□□□ 0.77
U2af1Q9D883 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
U2af1Q9D883 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
U2af1Q9D883 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
U2af1Q9D883 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
U2af1Q9D883 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
U2af1Q9D883 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms