Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp4cQ9D7F7 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.19■□□□□ 0.5
Chmp4cQ9D7F7 Gm27357-201ENSMUST00000183754 135 ntBASIC18.19■□□□□ 0.5
Chmp4cQ9D7F7 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.19■□□□□ 0.5
Chmp4cQ9D7F7 Ank2-226ENSMUST00000189368 339 ntBASIC18.19■□□□□ 0.5
Chmp4cQ9D7F7 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp4cQ9D7F7 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.19■□□□□ 0.5
Chmp4cQ9D7F7 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp4cQ9D7F7 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Chmp4cQ9D7F7 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp4cQ9D7F7 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.19■□□□□ 0.5
Chmp4cQ9D7F7 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp4cQ9D7F7 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp4cQ9D7F7 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp4cQ9D7F7 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Chmp4cQ9D7F7 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp4cQ9D7F7 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Chmp4cQ9D7F7 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp4cQ9D7F7 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp4cQ9D7F7 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp4cQ9D7F7 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp4cQ9D7F7 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp4cQ9D7F7 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp4cQ9D7F7 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp4cQ9D7F7 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp4cQ9D7F7 Gm12644-201ENSMUST00000119935 606 ntBASIC18.18■□□□□ 0.5
Chmp4cQ9D7F7 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Chmp4cQ9D7F7 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp4cQ9D7F7 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.18■□□□□ 0.5
Chmp4cQ9D7F7 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.18■□□□□ 0.5
Chmp4cQ9D7F7 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp4cQ9D7F7 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Chmp4cQ9D7F7 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp4cQ9D7F7 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp4cQ9D7F7 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp4cQ9D7F7 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp4cQ9D7F7 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Chmp4cQ9D7F7 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp4cQ9D7F7 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp4cQ9D7F7 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp4cQ9D7F7 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp4cQ9D7F7 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC18.17■□□□□ 0.5
Chmp4cQ9D7F7 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp4cQ9D7F7 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Chmp4cQ9D7F7 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.17■□□□□ 0.5
Chmp4cQ9D7F7 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Chmp4cQ9D7F7 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp4cQ9D7F7 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.17■□□□□ 0.5
Chmp4cQ9D7F7 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp4cQ9D7F7 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp4cQ9D7F7 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp4cQ9D7F7 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp4cQ9D7F7 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp4cQ9D7F7 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp4cQ9D7F7 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp4cQ9D7F7 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp4cQ9D7F7 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp4cQ9D7F7 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp4cQ9D7F7 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp4cQ9D7F7 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp4cQ9D7F7 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Chmp4cQ9D7F7 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.16■□□□□ 0.5
Chmp4cQ9D7F7 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.16■□□□□ 0.5
Chmp4cQ9D7F7 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.16■□□□□ 0.5
Chmp4cQ9D7F7 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp4cQ9D7F7 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp4cQ9D7F7 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Chmp4cQ9D7F7 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp4cQ9D7F7 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp4cQ9D7F7 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.16■□□□□ 0.5
Chmp4cQ9D7F7 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC18.16■□□□□ 0.5
Chmp4cQ9D7F7 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp4cQ9D7F7 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp4cQ9D7F7 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp4cQ9D7F7 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp4cQ9D7F7 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC18.15■□□□□ 0.5
Chmp4cQ9D7F7 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp4cQ9D7F7 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp4cQ9D7F7 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp4cQ9D7F7 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Chmp4cQ9D7F7 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Chmp4cQ9D7F7 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Chmp4cQ9D7F7 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp4cQ9D7F7 Gm8097-201ENSMUST00000117903 829 ntBASIC18.15■□□□□ 0.5
Chmp4cQ9D7F7 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp4cQ9D7F7 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.15■□□□□ 0.5
Chmp4cQ9D7F7 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp4cQ9D7F7 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC18.15■□□□□ 0.5
Chmp4cQ9D7F7 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp4cQ9D7F7 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Chmp4cQ9D7F7 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp4cQ9D7F7 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp4cQ9D7F7 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp4cQ9D7F7 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp4cQ9D7F7 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp4cQ9D7F7 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Chmp4cQ9D7F7 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp4cQ9D7F7 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp4cQ9D7F7 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp4cQ9D7F7 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms