Protein–RNA interactions for Protein: Q9D7D1

Rnf225, RING finger protein 225, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf225Q9D7D1 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf225Q9D7D1 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf225Q9D7D1 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf225Q9D7D1 Gm7230-201ENSMUST00000173026 815 ntBASIC16.03■□□□□ 0.16
Rnf225Q9D7D1 Gm8902-201ENSMUST00000174341 1096 ntBASIC16.03■□□□□ 0.16
Rnf225Q9D7D1 Gm20614-201ENSMUST00000177106 632 ntBASIC16.03■□□□□ 0.16
Rnf225Q9D7D1 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.03■□□□□ 0.16
Rnf225Q9D7D1 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf225Q9D7D1 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf225Q9D7D1 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf225Q9D7D1 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.03■□□□□ 0.16
Rnf225Q9D7D1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf225Q9D7D1 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf225Q9D7D1 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf225Q9D7D1 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf225Q9D7D1 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Rnf225Q9D7D1 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf225Q9D7D1 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf225Q9D7D1 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf225Q9D7D1 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf225Q9D7D1 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.03■□□□□ 0.16
Rnf225Q9D7D1 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf225Q9D7D1 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf225Q9D7D1 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf225Q9D7D1 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf225Q9D7D1 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
Rnf225Q9D7D1 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf225Q9D7D1 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf225Q9D7D1 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.02■□□□□ 0.16
Rnf225Q9D7D1 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf225Q9D7D1 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf225Q9D7D1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Rnf225Q9D7D1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf225Q9D7D1 Gm5970-201ENSMUST00000131638 1216 ntBASIC16.02■□□□□ 0.16
Rnf225Q9D7D1 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.02■□□□□ 0.16
Rnf225Q9D7D1 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.02■□□□□ 0.16
Rnf225Q9D7D1 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.02■□□□□ 0.16
Rnf225Q9D7D1 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.02■□□□□ 0.16
Rnf225Q9D7D1 Gm9682-201ENSMUST00000197505 556 ntBASIC16.02■□□□□ 0.16
Rnf225Q9D7D1 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.02■□□□□ 0.16
Rnf225Q9D7D1 AC153937.1-201ENSMUST00000218734 412 ntBASIC16.02■□□□□ 0.16
Rnf225Q9D7D1 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf225Q9D7D1 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Rnf225Q9D7D1 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf225Q9D7D1 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf225Q9D7D1 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf225Q9D7D1 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.02■□□□□ 0.15
Rnf225Q9D7D1 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
Rnf225Q9D7D1 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf225Q9D7D1 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf225Q9D7D1 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf225Q9D7D1 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf225Q9D7D1 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf225Q9D7D1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf225Q9D7D1 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf225Q9D7D1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf225Q9D7D1 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf225Q9D7D1 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.01■□□□□ 0.15
Rnf225Q9D7D1 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf225Q9D7D1 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC16.01■□□□□ 0.15
Rnf225Q9D7D1 Gm18489-201ENSMUST00000172565 551 ntBASIC16.01■□□□□ 0.15
Rnf225Q9D7D1 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf225Q9D7D1 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf225Q9D7D1 Gm5864-201ENSMUST00000202263 970 ntBASIC16.01■□□□□ 0.15
Rnf225Q9D7D1 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.01■□□□□ 0.15
Rnf225Q9D7D1 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf225Q9D7D1 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.01■□□□□ 0.15
Rnf225Q9D7D1 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Rnf225Q9D7D1 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf225Q9D7D1 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf225Q9D7D1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Rnf225Q9D7D1 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf225Q9D7D1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf225Q9D7D1 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf225Q9D7D1 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf225Q9D7D1 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf225Q9D7D1 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Rnf225Q9D7D1 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf225Q9D7D1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf225Q9D7D1 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf225Q9D7D1 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf225Q9D7D1 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rnf225Q9D7D1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Rnf225Q9D7D1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf225Q9D7D1 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rnf225Q9D7D1 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf225Q9D7D1 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf225Q9D7D1 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Rnf225Q9D7D1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf225Q9D7D1 Gm29340-201ENSMUST00000188763 3854 ntBASIC16■□□□□ 0.15
Rnf225Q9D7D1 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf225Q9D7D1 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf225Q9D7D1 Gm11453-201ENSMUST00000117318 1007 ntBASIC16■□□□□ 0.15
Rnf225Q9D7D1 Gm15173-201ENSMUST00000122049 433 ntBASIC16■□□□□ 0.15
Rnf225Q9D7D1 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16■□□□□ 0.15
Rnf225Q9D7D1 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rnf225Q9D7D1 Gm37153-201ENSMUST00000193637 231 ntBASIC16■□□□□ 0.15
Rnf225Q9D7D1 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16■□□□□ 0.15
Rnf225Q9D7D1 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rnf225Q9D7D1 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms