Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc7Q9D541 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc7Q9D541 Carlr-201ENSMUST00000181515 2574 ntBASIC17.76■□□□□ 0.43
Ccdc7Q9D541 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc7Q9D541 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc7Q9D541 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc7Q9D541 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc7Q9D541 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc7Q9D541 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.75■□□□□ 0.43
Ccdc7Q9D541 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc7Q9D541 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc7Q9D541 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.75■□□□□ 0.43
Ccdc7Q9D541 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc7Q9D541 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc7Q9D541 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Ccdc7Q9D541 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc7Q9D541 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.75■□□□□ 0.43
Ccdc7Q9D541 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.75■□□□□ 0.43
Ccdc7Q9D541 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.75■□□□□ 0.43
Ccdc7Q9D541 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.75■□□□□ 0.43
Ccdc7Q9D541 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc7Q9D541 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc7Q9D541 Gm34391-201ENSMUST00000203706 907 ntBASIC17.75■□□□□ 0.43
Ccdc7Q9D541 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.75■□□□□ 0.43
Ccdc7Q9D541 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.75■□□□□ 0.43
Ccdc7Q9D541 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.75■□□□□ 0.43
Ccdc7Q9D541 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Ccdc7Q9D541 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc7Q9D541 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.75■□□□□ 0.43
Ccdc7Q9D541 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc7Q9D541 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc7Q9D541 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc7Q9D541 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc7Q9D541 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Ccdc7Q9D541 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Ccdc7Q9D541 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc7Q9D541 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc7Q9D541 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc7Q9D541 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.74■□□□□ 0.43
Ccdc7Q9D541 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc7Q9D541 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ccdc7Q9D541 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc7Q9D541 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
Ccdc7Q9D541 Gm25990-201ENSMUST00000102440 86 ntBASIC17.74■□□□□ 0.43
Ccdc7Q9D541 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc7Q9D541 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc7Q9D541 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.74■□□□□ 0.43
Ccdc7Q9D541 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc7Q9D541 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.74■□□□□ 0.43
Ccdc7Q9D541 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc7Q9D541 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc7Q9D541 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ccdc7Q9D541 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc7Q9D541 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc7Q9D541 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc7Q9D541 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc7Q9D541 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Ccdc7Q9D541 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.73■□□□□ 0.43
Ccdc7Q9D541 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc7Q9D541 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc7Q9D541 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.73■□□□□ 0.43
Ccdc7Q9D541 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc7Q9D541 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Ccdc7Q9D541 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc7Q9D541 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc7Q9D541 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc7Q9D541 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc7Q9D541 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Ccdc7Q9D541 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc7Q9D541 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc7Q9D541 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.73■□□□□ 0.43
Ccdc7Q9D541 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.73■□□□□ 0.43
Ccdc7Q9D541 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.73■□□□□ 0.43
Ccdc7Q9D541 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc7Q9D541 Gm23547-201ENSMUST00000158210 271 ntBASIC17.73■□□□□ 0.43
Ccdc7Q9D541 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc7Q9D541 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Ccdc7Q9D541 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.73■□□□□ 0.43
Ccdc7Q9D541 Gm7977-201ENSMUST00000193787 748 ntBASIC17.73■□□□□ 0.43
Ccdc7Q9D541 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc7Q9D541 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc7Q9D541 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc7Q9D541 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc7Q9D541 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Ccdc7Q9D541 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc7Q9D541 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc7Q9D541 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc7Q9D541 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc7Q9D541 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc7Q9D541 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ccdc7Q9D541 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc7Q9D541 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc7Q9D541 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc7Q9D541 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc7Q9D541 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc7Q9D541 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.72■□□□□ 0.43
Ccdc7Q9D541 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc7Q9D541 Gm37153-201ENSMUST00000193637 231 ntBASIC17.72■□□□□ 0.43
Ccdc7Q9D541 Gm9682-201ENSMUST00000197505 556 ntBASIC17.72■□□□□ 0.43
Ccdc7Q9D541 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms