Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33aQ9D2N9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33aQ9D2N9 Gm11336-201ENSMUST00000118168 334 ntBASIC16.11■□□□□ 0.17
Vps33aQ9D2N9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33aQ9D2N9 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33aQ9D2N9 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33aQ9D2N9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33aQ9D2N9 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33aQ9D2N9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33aQ9D2N9 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33aQ9D2N9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Vps33aQ9D2N9 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33aQ9D2N9 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33aQ9D2N9 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33aQ9D2N9 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33aQ9D2N9 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33aQ9D2N9 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Vps33aQ9D2N9 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33aQ9D2N9 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps33aQ9D2N9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Vps33aQ9D2N9 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.1■□□□□ 0.17
Vps33aQ9D2N9 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33aQ9D2N9 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Vps33aQ9D2N9 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.1■□□□□ 0.17
Vps33aQ9D2N9 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
Vps33aQ9D2N9 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33aQ9D2N9 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33aQ9D2N9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33aQ9D2N9 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33aQ9D2N9 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33aQ9D2N9 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33aQ9D2N9 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.1■□□□□ 0.17
Vps33aQ9D2N9 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.1■□□□□ 0.17
Vps33aQ9D2N9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.1■□□□□ 0.17
Vps33aQ9D2N9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33aQ9D2N9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Vps33aQ9D2N9 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Vps33aQ9D2N9 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33aQ9D2N9 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33aQ9D2N9 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33aQ9D2N9 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC16.1■□□□□ 0.17
Vps33aQ9D2N9 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.1■□□□□ 0.17
Vps33aQ9D2N9 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps33aQ9D2N9 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
Vps33aQ9D2N9 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.09■□□□□ 0.17
Vps33aQ9D2N9 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Vps33aQ9D2N9 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.09■□□□□ 0.17
Vps33aQ9D2N9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps33aQ9D2N9 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Vps33aQ9D2N9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps33aQ9D2N9 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps33aQ9D2N9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vps33aQ9D2N9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps33aQ9D2N9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps33aQ9D2N9 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vps33aQ9D2N9 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps33aQ9D2N9 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps33aQ9D2N9 Gm12500-202ENSMUST00000186471 2428 ntBASIC16.09■□□□□ 0.17
Vps33aQ9D2N9 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps33aQ9D2N9 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vps33aQ9D2N9 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps33aQ9D2N9 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Vps33aQ9D2N9 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Vps33aQ9D2N9 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Vps33aQ9D2N9 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vps33aQ9D2N9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Vps33aQ9D2N9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Vps33aQ9D2N9 Gm22240-201ENSMUST00000175225 82 ntBASIC16.08■□□□□ 0.16
Vps33aQ9D2N9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Vps33aQ9D2N9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.08■□□□□ 0.16
Vps33aQ9D2N9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Vps33aQ9D2N9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
Vps33aQ9D2N9 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.08■□□□□ 0.16
Vps33aQ9D2N9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vps33aQ9D2N9 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Vps33aQ9D2N9 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vps33aQ9D2N9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Vps33aQ9D2N9 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Vps33aQ9D2N9 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Vps33aQ9D2N9 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Vps33aQ9D2N9 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vps33aQ9D2N9 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vps33aQ9D2N9 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.08■□□□□ 0.16
Vps33aQ9D2N9 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vps33aQ9D2N9 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.08■□□□□ 0.16
Vps33aQ9D2N9 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vps33aQ9D2N9 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vps33aQ9D2N9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vps33aQ9D2N9 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vps33aQ9D2N9 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vps33aQ9D2N9 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.07■□□□□ 0.16
Vps33aQ9D2N9 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vps33aQ9D2N9 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vps33aQ9D2N9 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vps33aQ9D2N9 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vps33aQ9D2N9 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vps33aQ9D2N9 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
Vps33aQ9D2N9 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Vps33aQ9D2N9 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Vps33aQ9D2N9 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms