Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssbp3Q9D032 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ssbp3Q9D032 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.67□□□□□ -0.38
Ssbp3Q9D032 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssbp3Q9D032 Gm27300-201ENSMUST00000184085 97 ntBASIC12.67□□□□□ -0.38
Ssbp3Q9D032 Gm27335-201ENSMUST00000184758 97 ntBASIC12.67□□□□□ -0.38
Ssbp3Q9D032 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ssbp3Q9D032 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.67□□□□□ -0.38
Ssbp3Q9D032 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssbp3Q9D032 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssbp3Q9D032 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.67□□□□□ -0.38
Ssbp3Q9D032 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssbp3Q9D032 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ssbp3Q9D032 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ssbp3Q9D032 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssbp3Q9D032 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssbp3Q9D032 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssbp3Q9D032 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssbp3Q9D032 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssbp3Q9D032 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ssbp3Q9D032 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssbp3Q9D032 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssbp3Q9D032 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ssbp3Q9D032 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssbp3Q9D032 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssbp3Q9D032 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssbp3Q9D032 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ssbp3Q9D032 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.67□□□□□ -0.38
Ssbp3Q9D032 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssbp3Q9D032 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssbp3Q9D032 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssbp3Q9D032 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.66□□□□□ -0.38
Ssbp3Q9D032 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ssbp3Q9D032 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.66□□□□□ -0.38
Ssbp3Q9D032 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssbp3Q9D032 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssbp3Q9D032 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssbp3Q9D032 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ssbp3Q9D032 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssbp3Q9D032 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssbp3Q9D032 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssbp3Q9D032 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssbp3Q9D032 Gm14494-201ENSMUST00000118786 435 ntBASIC12.66□□□□□ -0.38
Ssbp3Q9D032 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ssbp3Q9D032 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ssbp3Q9D032 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ssbp3Q9D032 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.66□□□□□ -0.38
Ssbp3Q9D032 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.66□□□□□ -0.38
Ssbp3Q9D032 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.66□□□□□ -0.38
Ssbp3Q9D032 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssbp3Q9D032 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ssbp3Q9D032 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssbp3Q9D032 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ssbp3Q9D032 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssbp3Q9D032 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ssbp3Q9D032 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.66□□□□□ -0.38
Ssbp3Q9D032 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ssbp3Q9D032 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssbp3Q9D032 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
Ssbp3Q9D032 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ssbp3Q9D032 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssbp3Q9D032 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssbp3Q9D032 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ssbp3Q9D032 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssbp3Q9D032 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.65□□□□□ -0.38
Ssbp3Q9D032 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ssbp3Q9D032 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssbp3Q9D032 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ssbp3Q9D032 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Ssbp3Q9D032 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ssbp3Q9D032 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ssbp3Q9D032 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.65□□□□□ -0.38
Ssbp3Q9D032 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssbp3Q9D032 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssbp3Q9D032 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.65□□□□□ -0.38
Ssbp3Q9D032 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssbp3Q9D032 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssbp3Q9D032 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssbp3Q9D032 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssbp3Q9D032 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ssbp3Q9D032 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.65□□□□□ -0.38
Ssbp3Q9D032 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.65□□□□□ -0.38
Ssbp3Q9D032 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.65□□□□□ -0.38
Ssbp3Q9D032 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.65□□□□□ -0.38
Ssbp3Q9D032 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.65□□□□□ -0.38
Ssbp3Q9D032 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.65□□□□□ -0.38
Ssbp3Q9D032 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ssbp3Q9D032 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.65□□□□□ -0.38
Ssbp3Q9D032 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssbp3Q9D032 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ssbp3Q9D032 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssbp3Q9D032 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ssbp3Q9D032 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.65□□□□□ -0.39
Ssbp3Q9D032 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.65□□□□□ -0.39
Ssbp3Q9D032 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Ssbp3Q9D032 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssbp3Q9D032 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.64□□□□□ -0.39
Ssbp3Q9D032 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ssbp3Q9D032 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ssbp3Q9D032 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms