Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hdhd3Q9CYW4 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Gm27389-201ENSMUST00000183622 195 ntBASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Gm45058-201ENSMUST00000205810 766 ntBASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Gm18959-201ENSMUST00000208954 655 ntBASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Gm21559-201ENSMUST00000220638 855 ntBASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Gm8587-201ENSMUST00000076538 843 ntBASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hdhd3Q9CYW4 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Hdhd3Q9CYW4 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hdhd3Q9CYW4 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hdhd3Q9CYW4 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Hdhd3Q9CYW4 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hdhd3Q9CYW4 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Hdhd3Q9CYW4 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hdhd3Q9CYW4 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hdhd3Q9CYW4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hdhd3Q9CYW4 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hdhd3Q9CYW4 Gm22240-201ENSMUST00000175225 82 ntBASIC12.36□□□□□ -0.43
Hdhd3Q9CYW4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.36□□□□□ -0.43
Hdhd3Q9CYW4 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Hdhd3Q9CYW4 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.36□□□□□ -0.43
Hdhd3Q9CYW4 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
Hdhd3Q9CYW4 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hdhd3Q9CYW4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hdhd3Q9CYW4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Hdhd3Q9CYW4 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hdhd3Q9CYW4 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hdhd3Q9CYW4 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hdhd3Q9CYW4 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hdhd3Q9CYW4 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hdhd3Q9CYW4 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hdhd3Q9CYW4 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Hdhd3Q9CYW4 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hdhd3Q9CYW4 Grk6-207ENSMUST00000225925 2769 ntBASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Gm9987-201ENSMUST00000069768 567 ntBASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Hdhd3Q9CYW4 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms