Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf135Q9CWS1 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf135Q9CWS1 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf135Q9CWS1 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.8■□□□□ 0.12
Rnf135Q9CWS1 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.8■□□□□ 0.12
Rnf135Q9CWS1 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf135Q9CWS1 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
Rnf135Q9CWS1 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf135Q9CWS1 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf135Q9CWS1 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf135Q9CWS1 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rnf135Q9CWS1 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.8■□□□□ 0.12
Rnf135Q9CWS1 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf135Q9CWS1 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf135Q9CWS1 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf135Q9CWS1 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf135Q9CWS1 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf135Q9CWS1 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf135Q9CWS1 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Rnf135Q9CWS1 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.79■□□□□ 0.12
Rnf135Q9CWS1 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.79■□□□□ 0.12
Rnf135Q9CWS1 Gm7862-201ENSMUST00000121461 292 ntBASIC15.79■□□□□ 0.12
Rnf135Q9CWS1 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.79■□□□□ 0.12
Rnf135Q9CWS1 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.79■□□□□ 0.12
Rnf135Q9CWS1 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Rnf135Q9CWS1 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.79■□□□□ 0.12
Rnf135Q9CWS1 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf135Q9CWS1 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf135Q9CWS1 Gm6296-201ENSMUST00000222599 943 ntBASIC15.79■□□□□ 0.12
Rnf135Q9CWS1 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf135Q9CWS1 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf135Q9CWS1 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf135Q9CWS1 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf135Q9CWS1 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf135Q9CWS1 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf135Q9CWS1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf135Q9CWS1 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf135Q9CWS1 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf135Q9CWS1 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rnf135Q9CWS1 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf135Q9CWS1 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf135Q9CWS1 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rnf135Q9CWS1 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rnf135Q9CWS1 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf135Q9CWS1 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf135Q9CWS1 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf135Q9CWS1 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf135Q9CWS1 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Rnf135Q9CWS1 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf135Q9CWS1 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf135Q9CWS1 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Rnf135Q9CWS1 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.78■□□□□ 0.12
Rnf135Q9CWS1 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Rnf135Q9CWS1 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf135Q9CWS1 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Rnf135Q9CWS1 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.78■□□□□ 0.12
Rnf135Q9CWS1 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.78■□□□□ 0.12
Rnf135Q9CWS1 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf135Q9CWS1 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Rnf135Q9CWS1 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf135Q9CWS1 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf135Q9CWS1 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Rnf135Q9CWS1 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf135Q9CWS1 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.78■□□□□ 0.12
Rnf135Q9CWS1 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf135Q9CWS1 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf135Q9CWS1 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf135Q9CWS1 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf135Q9CWS1 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf135Q9CWS1 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf135Q9CWS1 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf135Q9CWS1 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf135Q9CWS1 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf135Q9CWS1 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf135Q9CWS1 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf135Q9CWS1 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.77■□□□□ 0.12
Rnf135Q9CWS1 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.77■□□□□ 0.12
Rnf135Q9CWS1 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf135Q9CWS1 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.77■□□□□ 0.12
Rnf135Q9CWS1 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.77■□□□□ 0.12
Rnf135Q9CWS1 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.77■□□□□ 0.12
Rnf135Q9CWS1 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.77■□□□□ 0.12
Rnf135Q9CWS1 Gm8655-201ENSMUST00000221159 852 ntBASIC15.77■□□□□ 0.12
Rnf135Q9CWS1 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf135Q9CWS1 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf135Q9CWS1 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf135Q9CWS1 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Rnf135Q9CWS1 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf135Q9CWS1 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf135Q9CWS1 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf135Q9CWS1 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf135Q9CWS1 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf135Q9CWS1 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf135Q9CWS1 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf135Q9CWS1 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf135Q9CWS1 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.76■□□□□ 0.11
Rnf135Q9CWS1 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf135Q9CWS1 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.76■□□□□ 0.11
Rnf135Q9CWS1 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf135Q9CWS1 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms