Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Otud1Q9CUB6 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Otud1Q9CUB6 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.34□□□□□ -0.11
Otud1Q9CUB6 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Otud1Q9CUB6 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Otud1Q9CUB6 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Otud1Q9CUB6 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Otud1Q9CUB6 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Otud1Q9CUB6 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Otud1Q9CUB6 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Otud1Q9CUB6 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Otud1Q9CUB6 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Otud1Q9CUB6 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Gm23935-201ENSMUST00000102303 57 ntBASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Gm24270-201ENSMUST00000102326 57 ntBASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Gm12008-201ENSMUST00000117791 755 ntBASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Gm24245-201ENSMUST00000157318 57 ntBASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Otud1Q9CUB6 AC073947.1-201ENSMUST00000216991 649 ntBASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Thap2-203ENSMUST00000218989 527 ntBASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Otud1Q9CUB6 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Gm9385-201ENSMUST00000117563 472 ntBASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Gm6736-201ENSMUST00000166583 948 ntBASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Otud1Q9CUB6 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Otud1Q9CUB6 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Otud1Q9CUB6 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Otud1Q9CUB6 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Otud1Q9CUB6 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Otud1Q9CUB6 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Otud1Q9CUB6 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Otud1Q9CUB6 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Otud1Q9CUB6 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Otud1Q9CUB6 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Otud1Q9CUB6 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Otud1Q9CUB6 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.31□□□□□ -0.12
Otud1Q9CUB6 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.31□□□□□ -0.12
Otud1Q9CUB6 Gm16198-201ENSMUST00000118766 670 ntBASIC14.31□□□□□ -0.12
Otud1Q9CUB6 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.31□□□□□ -0.12
Otud1Q9CUB6 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms