Protein–RNA interactions for Protein: Q9CRA7

Atp5s, ATP synthase subunit s, mitochondrial, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp5sQ9CRA7 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atp5sQ9CRA7 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atp5sQ9CRA7 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atp5sQ9CRA7 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atp5sQ9CRA7 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atp5sQ9CRA7 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atp5sQ9CRA7 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Atp5sQ9CRA7 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atp5sQ9CRA7 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Atp5sQ9CRA7 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atp5sQ9CRA7 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atp5sQ9CRA7 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Mir1668-201ENSMUST00000184114 107 ntBASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Atp5sQ9CRA7 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Atp5sQ9CRA7 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp5sQ9CRA7 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp5sQ9CRA7 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp5sQ9CRA7 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp5sQ9CRA7 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Atp5sQ9CRA7 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp5sQ9CRA7 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp5sQ9CRA7 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp5sQ9CRA7 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp5sQ9CRA7 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp5sQ9CRA7 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp5sQ9CRA7 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Atp5sQ9CRA7 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp5sQ9CRA7 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Atp5sQ9CRA7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Atp5sQ9CRA7 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.79□□□□□ -0.36
Atp5sQ9CRA7 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp5sQ9CRA7 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Atp5sQ9CRA7 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp5sQ9CRA7 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp5sQ9CRA7 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp5sQ9CRA7 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Atp5sQ9CRA7 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Atp5sQ9CRA7 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Atp5sQ9CRA7 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp5sQ9CRA7 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp5sQ9CRA7 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Atp5sQ9CRA7 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Atp5sQ9CRA7 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp5sQ9CRA7 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp5sQ9CRA7 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Atp5sQ9CRA7 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp5sQ9CRA7 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp5sQ9CRA7 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp5sQ9CRA7 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp5sQ9CRA7 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp5sQ9CRA7 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp5sQ9CRA7 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Atp5sQ9CRA7 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Atp5sQ9CRA7 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp5sQ9CRA7 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Atp5sQ9CRA7 Gm23547-201ENSMUST00000158210 271 ntBASIC12.78□□□□□ -0.36
Atp5sQ9CRA7 Mir5122-201ENSMUST00000175004 89 ntBASIC12.78□□□□□ -0.36
Atp5sQ9CRA7 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.78□□□□□ -0.36
Atp5sQ9CRA7 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.78□□□□□ -0.36
Atp5sQ9CRA7 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp5sQ9CRA7 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp5sQ9CRA7 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp5sQ9CRA7 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp5sQ9CRA7 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms