Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cotl1Q9CQI6 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.98□□□□□ -0.49
Cotl1Q9CQI6 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cotl1Q9CQI6 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cotl1Q9CQI6 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cotl1Q9CQI6 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cotl1Q9CQI6 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cotl1Q9CQI6 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cotl1Q9CQI6 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cotl1Q9CQI6 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cotl1Q9CQI6 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cotl1Q9CQI6 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Cotl1Q9CQI6 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cotl1Q9CQI6 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cotl1Q9CQI6 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Gm37728-201ENSMUST00000195025 2292 ntBASIC11.97□□□□□ -0.49
Cotl1Q9CQI6 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Cotl1Q9CQI6 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cotl1Q9CQI6 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cotl1Q9CQI6 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cotl1Q9CQI6 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cotl1Q9CQI6 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cotl1Q9CQI6 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cotl1Q9CQI6 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cotl1Q9CQI6 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cotl1Q9CQI6 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cotl1Q9CQI6 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cotl1Q9CQI6 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cotl1Q9CQI6 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cotl1Q9CQI6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Cotl1Q9CQI6 Gm13186-201ENSMUST00000118031 316 ntBASIC11.96□□□□□ -0.49
Cotl1Q9CQI6 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC11.96□□□□□ -0.49
Cotl1Q9CQI6 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cotl1Q9CQI6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cotl1Q9CQI6 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC11.96□□□□□ -0.49
Cotl1Q9CQI6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cotl1Q9CQI6 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cotl1Q9CQI6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Cotl1Q9CQI6 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cotl1Q9CQI6 Gm5417-201ENSMUST00000079706 384 ntBASIC11.96□□□□□ -0.49
Cotl1Q9CQI6 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cotl1Q9CQI6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cotl1Q9CQI6 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.96□□□□□ -0.49
Cotl1Q9CQI6 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cotl1Q9CQI6 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
Cotl1Q9CQI6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.5
Cotl1Q9CQI6 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cotl1Q9CQI6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cotl1Q9CQI6 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cotl1Q9CQI6 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cotl1Q9CQI6 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cotl1Q9CQI6 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cotl1Q9CQI6 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cotl1Q9CQI6 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cotl1Q9CQI6 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cotl1Q9CQI6 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cotl1Q9CQI6 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cotl1Q9CQI6 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Cotl1Q9CQI6 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cotl1Q9CQI6 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cotl1Q9CQI6 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cotl1Q9CQI6 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cotl1Q9CQI6 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cotl1Q9CQI6 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.95□□□□□ -0.5
Cotl1Q9CQI6 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms