Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krt88Q9CPR6 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Krt88Q9CPR6 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Krt88Q9CPR6 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Krt88Q9CPR6 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Krt88Q9CPR6 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Krt88Q9CPR6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Krt88Q9CPR6 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Krt88Q9CPR6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.71□□□□□ -0.21
Krt88Q9CPR6 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Krt88Q9CPR6 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Krt88Q9CPR6 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Krt88Q9CPR6 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Krt88Q9CPR6 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Krt88Q9CPR6 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Krt88Q9CPR6 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Krt88Q9CPR6 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Krt88Q9CPR6 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Krt88Q9CPR6 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Krt88Q9CPR6 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.71□□□□□ -0.22
Krt88Q9CPR6 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Krt88Q9CPR6 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Krt88Q9CPR6 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.71□□□□□ -0.22
Krt88Q9CPR6 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Krt88Q9CPR6 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Krt88Q9CPR6 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Krt88Q9CPR6 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Krt88Q9CPR6 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Krt88Q9CPR6 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Krt88Q9CPR6 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Krt88Q9CPR6 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Krt88Q9CPR6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Krt88Q9CPR6 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Krt88Q9CPR6 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.7□□□□□ -0.22
Krt88Q9CPR6 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.7□□□□□ -0.22
Krt88Q9CPR6 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Krt88Q9CPR6 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.7□□□□□ -0.22
Krt88Q9CPR6 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Krt88Q9CPR6 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Krt88Q9CPR6 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Krt88Q9CPR6 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Krt88Q9CPR6 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Krt88Q9CPR6 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Krt88Q9CPR6 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Krt88Q9CPR6 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Krt88Q9CPR6 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Krt88Q9CPR6 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Krt88Q9CPR6 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Krt88Q9CPR6 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Krt88Q9CPR6 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Krt88Q9CPR6 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.7□□□□□ -0.22
Krt88Q9CPR6 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Krt88Q9CPR6 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Krt88Q9CPR6 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms