Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim33Q99PP7 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim33Q99PP7 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim33Q99PP7 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim33Q99PP7 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim33Q99PP7 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim33Q99PP7 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim33Q99PP7 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.06■□□□□ 0
Trim33Q99PP7 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim33Q99PP7 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim33Q99PP7 Gm14722-201ENSMUST00000118943 689 ntBASIC15.06■□□□□ 0
Trim33Q99PP7 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim33Q99PP7 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.06■□□□□ 0
Trim33Q99PP7 Mir5131-201ENSMUST00000175426 93 ntBASIC15.06■□□□□ 0
Trim33Q99PP7 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim33Q99PP7 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.06■□□□□ 0
Trim33Q99PP7 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim33Q99PP7 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim33Q99PP7 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Trim33Q99PP7 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim33Q99PP7 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.06■□□□□ 0
Trim33Q99PP7 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim33Q99PP7 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim33Q99PP7 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim33Q99PP7 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim33Q99PP7 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trim33Q99PP7 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim33Q99PP7 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.06■□□□□ 0
Trim33Q99PP7 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim33Q99PP7 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Trim33Q99PP7 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim33Q99PP7 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trim33Q99PP7 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim33Q99PP7 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Trim33Q99PP7 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Trim33Q99PP7 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim33Q99PP7 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trim33Q99PP7 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim33Q99PP7 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim33Q99PP7 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim33Q99PP7 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim33Q99PP7 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim33Q99PP7 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.05■□□□□ -0
Trim33Q99PP7 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.05■□□□□ -0
Trim33Q99PP7 Gm5682-201ENSMUST00000173402 505 ntBASIC15.05■□□□□ -0
Trim33Q99PP7 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.05■□□□□ -0
Trim33Q99PP7 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.05■□□□□ -0
Trim33Q99PP7 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.05■□□□□ -0
Trim33Q99PP7 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.05■□□□□ -0
Trim33Q99PP7 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trim33Q99PP7 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trim33Q99PP7 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim33Q99PP7 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim33Q99PP7 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim33Q99PP7 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.05■□□□□ -0
Trim33Q99PP7 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim33Q99PP7 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim33Q99PP7 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim33Q99PP7 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim33Q99PP7 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim33Q99PP7 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.05■□□□□ -0
Trim33Q99PP7 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim33Q99PP7 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim33Q99PP7 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim33Q99PP7 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim33Q99PP7 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim33Q99PP7 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim33Q99PP7 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.04■□□□□ -0
Trim33Q99PP7 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim33Q99PP7 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.04■□□□□ -0
Trim33Q99PP7 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim33Q99PP7 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim33Q99PP7 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim33Q99PP7 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.04■□□□□ -0
Trim33Q99PP7 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.04■□□□□ -0
Trim33Q99PP7 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.04■□□□□ -0
Trim33Q99PP7 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
Trim33Q99PP7 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim33Q99PP7 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trim33Q99PP7 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim33Q99PP7 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim33Q99PP7 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim33Q99PP7 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.04■□□□□ -0
Trim33Q99PP7 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim33Q99PP7 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim33Q99PP7 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim33Q99PP7 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim33Q99PP7 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim33Q99PP7 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim33Q99PP7 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim33Q99PP7 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim33Q99PP7 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim33Q99PP7 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.03■□□□□ -0
Trim33Q99PP7 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Trim33Q99PP7 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim33Q99PP7 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim33Q99PP7 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim33Q99PP7 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim33Q99PP7 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim33Q99PP7 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms