Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Gm8825-201ENSMUST00000182565 998 ntBASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Gm4518-201ENSMUST00000182638 718 ntBASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim8Q99PJ2 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim8Q99PJ2 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim8Q99PJ2 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim8Q99PJ2 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trim8Q99PJ2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim8Q99PJ2 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim8Q99PJ2 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim8Q99PJ2 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Trim8Q99PJ2 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim8Q99PJ2 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trim8Q99PJ2 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim8Q99PJ2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trim8Q99PJ2 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim8Q99PJ2 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim8Q99PJ2 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim8Q99PJ2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trim8Q99PJ2 Gm13312-201ENSMUST00000119631 718 ntBASIC14.89□□□□□ -0.03
Trim8Q99PJ2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim8Q99PJ2 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.89□□□□□ -0.03
Trim8Q99PJ2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Trim8Q99PJ2 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.89□□□□□ -0.03
Trim8Q99PJ2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim8Q99PJ2 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.89□□□□□ -0.03
Trim8Q99PJ2 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim8Q99PJ2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim8Q99PJ2 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Trim8Q99PJ2 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim8Q99PJ2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim8Q99PJ2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trim8Q99PJ2 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.88□□□□□ -0.03
Trim8Q99PJ2 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trim8Q99PJ2 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trim8Q99PJ2 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim8Q99PJ2 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim8Q99PJ2 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim8Q99PJ2 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trim8Q99PJ2 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trim8Q99PJ2 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim8Q99PJ2 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim8Q99PJ2 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trim8Q99PJ2 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim8Q99PJ2 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim8Q99PJ2 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim8Q99PJ2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim8Q99PJ2 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trim8Q99PJ2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.88□□□□□ -0.03
Trim8Q99PJ2 Gm14859-201ENSMUST00000117752 357 ntBASIC14.88□□□□□ -0.03
Trim8Q99PJ2 Olfr129-201ENSMUST00000122318 993 ntBASIC14.88□□□□□ -0.03
Trim8Q99PJ2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.88□□□□□ -0.03
Trim8Q99PJ2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim8Q99PJ2 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trim8Q99PJ2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim8Q99PJ2 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim8Q99PJ2 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.88□□□□□ -0.03
Trim8Q99PJ2 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trim8Q99PJ2 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim8Q99PJ2 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim8Q99PJ2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim8Q99PJ2 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Trim8Q99PJ2 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms