Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Pcdh15Q99PJ1 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh15Q99PJ1 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh15Q99PJ1 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC16.92■□□□□ 0.3
Pcdh15Q99PJ1 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh15Q99PJ1 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh15Q99PJ1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh15Q99PJ1 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh15Q99PJ1 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh15Q99PJ1 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh15Q99PJ1 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh15Q99PJ1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh15Q99PJ1 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh15Q99PJ1 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh15Q99PJ1 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh15Q99PJ1 Olfr286-202ENSMUST00000205305 969 ntBASIC16.92■□□□□ 0.3
Pcdh15Q99PJ1 Gm8463-201ENSMUST00000208573 613 ntBASIC16.92■□□□□ 0.3
Pcdh15Q99PJ1 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh15Q99PJ1 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh15Q99PJ1 Gm45667-201ENSMUST00000210380 1316 ntBASIC16.92■□□□□ 0.3
Pcdh15Q99PJ1 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh15Q99PJ1 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.91■□□□□ 0.3
Pcdh15Q99PJ1 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pcdh15Q99PJ1 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh15Q99PJ1 Gm37424-201ENSMUST00000191727 561 ntBASIC16.91■□□□□ 0.3
Pcdh15Q99PJ1 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC16.91■□□□□ 0.3
Pcdh15Q99PJ1 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh15Q99PJ1 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.91■□□□□ 0.3
Pcdh15Q99PJ1 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Pcdh15Q99PJ1 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh15Q99PJ1 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.91■□□□□ 0.3
Pcdh15Q99PJ1 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh15Q99PJ1 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdh15Q99PJ1 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh15Q99PJ1 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdh15Q99PJ1 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdh15Q99PJ1 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh15Q99PJ1 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh15Q99PJ1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh15Q99PJ1 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.9■□□□□ 0.3
Pcdh15Q99PJ1 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh15Q99PJ1 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh15Q99PJ1 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.9■□□□□ 0.3
Pcdh15Q99PJ1 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh15Q99PJ1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Pcdh15Q99PJ1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh15Q99PJ1 Gm23931-201ENSMUST00000103842 109 ntBASIC16.9■□□□□ 0.3
Pcdh15Q99PJ1 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh15Q99PJ1 Gm14660-201ENSMUST00000119809 575 ntBASIC16.9■□□□□ 0.3
Pcdh15Q99PJ1 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC16.9■□□□□ 0.3
Pcdh15Q99PJ1 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh15Q99PJ1 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Pcdh15Q99PJ1 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh15Q99PJ1 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Pcdh15Q99PJ1 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh15Q99PJ1 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pcdh15Q99PJ1 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh15Q99PJ1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh15Q99PJ1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh15Q99PJ1 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Pcdh15Q99PJ1 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC16.89■□□□□ 0.29
Pcdh15Q99PJ1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh15Q99PJ1 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcdh15Q99PJ1 Gm6244-201ENSMUST00000178732 841 ntBASIC16.89■□□□□ 0.29
Pcdh15Q99PJ1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Pcdh15Q99PJ1 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.89■□□□□ 0.29
Pcdh15Q99PJ1 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh15Q99PJ1 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.89■□□□□ 0.29
Pcdh15Q99PJ1 Gm10478-201ENSMUST00000084451 396 ntBASIC16.89■□□□□ 0.29
Pcdh15Q99PJ1 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcdh15Q99PJ1 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh15Q99PJ1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcdh15Q99PJ1 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh15Q99PJ1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcdh15Q99PJ1 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh15Q99PJ1 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdh15Q99PJ1 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Pcdh15Q99PJ1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh15Q99PJ1 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdh15Q99PJ1 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh15Q99PJ1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh15Q99PJ1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh15Q99PJ1 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh15Q99PJ1 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.88■□□□□ 0.29
Pcdh15Q99PJ1 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdh15Q99PJ1 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdh15Q99PJ1 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.88■□□□□ 0.29
Pcdh15Q99PJ1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh15Q99PJ1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh15Q99PJ1 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh15Q99PJ1 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh15Q99PJ1 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Pcdh15Q99PJ1 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh15Q99PJ1 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdh15Q99PJ1 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh15Q99PJ1 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdh15Q99PJ1 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh15Q99PJ1 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh15Q99PJ1 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh15Q99PJ1 Gm14452-201ENSMUST00000118680 1632 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms