Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkd1Q99MH6 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkd1Q99MH6 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkd1Q99MH6 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkd1Q99MH6 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkd1Q99MH6 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkd1Q99MH6 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkd1Q99MH6 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkd1Q99MH6 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkd1Q99MH6 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkd1Q99MH6 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.33□□□□□ -0.12
Nkd1Q99MH6 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkd1Q99MH6 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkd1Q99MH6 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkd1Q99MH6 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkd1Q99MH6 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkd1Q99MH6 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkd1Q99MH6 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkd1Q99MH6 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkd1Q99MH6 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkd1Q99MH6 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkd1Q99MH6 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.33□□□□□ -0.12
Nkd1Q99MH6 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkd1Q99MH6 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkd1Q99MH6 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkd1Q99MH6 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkd1Q99MH6 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkd1Q99MH6 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nkd1Q99MH6 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkd1Q99MH6 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkd1Q99MH6 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkd1Q99MH6 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Nkd1Q99MH6 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.32□□□□□ -0.12
Nkd1Q99MH6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkd1Q99MH6 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkd1Q99MH6 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkd1Q99MH6 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkd1Q99MH6 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nkd1Q99MH6 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkd1Q99MH6 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.32□□□□□ -0.12
Nkd1Q99MH6 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.32□□□□□ -0.12
Nkd1Q99MH6 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Nkd1Q99MH6 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Nkd1Q99MH6 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Nkd1Q99MH6 Gm27867-201ENSMUST00000184778 125 ntBASIC14.32□□□□□ -0.12
Nkd1Q99MH6 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.32□□□□□ -0.12
Nkd1Q99MH6 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Nkd1Q99MH6 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nkd1Q99MH6 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkd1Q99MH6 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkd1Q99MH6 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Nkd1Q99MH6 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkd1Q99MH6 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nkd1Q99MH6 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkd1Q99MH6 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.32□□□□□ -0.12
Nkd1Q99MH6 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkd1Q99MH6 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkd1Q99MH6 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkd1Q99MH6 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkd1Q99MH6 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nkd1Q99MH6 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkd1Q99MH6 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Gm14722-201ENSMUST00000118943 689 ntBASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkd1Q99MH6 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nkd1Q99MH6 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms