Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scrt1Q99M85 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.3□□□□□ -0.28
Scrt1Q99M85 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.3□□□□□ -0.28
Scrt1Q99M85 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.3□□□□□ -0.28
Scrt1Q99M85 Gm20553-201ENSMUST00000204205 844 ntBASIC13.3□□□□□ -0.28
Scrt1Q99M85 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.3□□□□□ -0.28
Scrt1Q99M85 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Scrt1Q99M85 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scrt1Q99M85 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scrt1Q99M85 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scrt1Q99M85 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Scrt1Q99M85 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scrt1Q99M85 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scrt1Q99M85 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scrt1Q99M85 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scrt1Q99M85 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Scrt1Q99M85 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scrt1Q99M85 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.29□□□□□ -0.28
Scrt1Q99M85 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Scrt1Q99M85 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scrt1Q99M85 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scrt1Q99M85 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Scrt1Q99M85 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scrt1Q99M85 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scrt1Q99M85 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scrt1Q99M85 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scrt1Q99M85 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scrt1Q99M85 Gm12428-201ENSMUST00000119844 727 ntBASIC13.28□□□□□ -0.28
Scrt1Q99M85 Gm18889-201ENSMUST00000174284 929 ntBASIC13.28□□□□□ -0.28
Scrt1Q99M85 Gm22175-201ENSMUST00000175007 78 ntBASIC13.28□□□□□ -0.28
Scrt1Q99M85 Gm27301-201ENSMUST00000184012 127 ntBASIC13.28□□□□□ -0.28
Scrt1Q99M85 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.28□□□□□ -0.28
Scrt1Q99M85 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.28□□□□□ -0.28
Scrt1Q99M85 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scrt1Q99M85 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scrt1Q99M85 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scrt1Q99M85 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scrt1Q99M85 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Scrt1Q99M85 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scrt1Q99M85 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scrt1Q99M85 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.28□□□□□ -0.28
Scrt1Q99M85 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scrt1Q99M85 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.28□□□□□ -0.28
Scrt1Q99M85 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scrt1Q99M85 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scrt1Q99M85 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scrt1Q99M85 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scrt1Q99M85 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scrt1Q99M85 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Scrt1Q99M85 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scrt1Q99M85 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scrt1Q99M85 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Scrt1Q99M85 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scrt1Q99M85 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scrt1Q99M85 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Scrt1Q99M85 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scrt1Q99M85 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scrt1Q99M85 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scrt1Q99M85 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.27□□□□□ -0.28
Scrt1Q99M85 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Scrt1Q99M85 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Scrt1Q99M85 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Scrt1Q99M85 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Scrt1Q99M85 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.27□□□□□ -0.29
Scrt1Q99M85 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scrt1Q99M85 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms