Protein–RNA interactions for Protein: Q99LG0

Usp16, Ubiquitin carboxyl-terminal hydrolase 16, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp16Q99LG0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp16Q99LG0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC19.36■□□□□ 0.69
Usp16Q99LG0 Gm2272-201ENSMUST00000194903 582 ntBASIC19.36■□□□□ 0.69
Usp16Q99LG0 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Usp16Q99LG0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp16Q99LG0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp16Q99LG0 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp16Q99LG0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Usp16Q99LG0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp16Q99LG0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp16Q99LG0 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Usp16Q99LG0 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp16Q99LG0 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp16Q99LG0 Gm5648-201ENSMUST00000122244 1587 ntBASIC19.36■□□□□ 0.69
Usp16Q99LG0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp16Q99LG0 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp16Q99LG0 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp16Q99LG0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp16Q99LG0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Usp16Q99LG0 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp16Q99LG0 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Usp16Q99LG0 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp16Q99LG0 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp16Q99LG0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Usp16Q99LG0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC19.35■□□□□ 0.69
Usp16Q99LG0 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC19.35■□□□□ 0.69
Usp16Q99LG0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp16Q99LG0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp16Q99LG0 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp16Q99LG0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp16Q99LG0 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Usp16Q99LG0 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC19.35■□□□□ 0.69
Usp16Q99LG0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp16Q99LG0 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Usp16Q99LG0 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC19.35■□□□□ 0.69
Usp16Q99LG0 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp16Q99LG0 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp16Q99LG0 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp16Q99LG0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp16Q99LG0 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC19.34■□□□□ 0.69
Usp16Q99LG0 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Usp16Q99LG0 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp16Q99LG0 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp16Q99LG0 Gm15427-201ENSMUST00000117288 531 ntBASIC19.34■□□□□ 0.69
Usp16Q99LG0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC19.34■□□□□ 0.69
Usp16Q99LG0 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Usp16Q99LG0 AC164567.1-201ENSMUST00000219185 960 ntBASIC19.34■□□□□ 0.69
Usp16Q99LG0 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp16Q99LG0 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp16Q99LG0 Asic1-205ENSMUST00000228185 1818 ntBASIC19.34■□□□□ 0.69
Usp16Q99LG0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Usp16Q99LG0 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp16Q99LG0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
Usp16Q99LG0 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC19.33■□□□□ 0.69
Usp16Q99LG0 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp16Q99LG0 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Usp16Q99LG0 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp16Q99LG0 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp16Q99LG0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp16Q99LG0 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp16Q99LG0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Usp16Q99LG0 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp16Q99LG0 Gm6226-201ENSMUST00000117765 1146 ntBASIC19.33■□□□□ 0.68
Usp16Q99LG0 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC19.33■□□□□ 0.68
Usp16Q99LG0 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC19.33■□□□□ 0.68
Usp16Q99LG0 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp16Q99LG0 Gm6736-201ENSMUST00000166583 948 ntBASIC19.33■□□□□ 0.68
Usp16Q99LG0 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC19.33■□□□□ 0.68
Usp16Q99LG0 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC19.33■□□□□ 0.68
Usp16Q99LG0 Gm2756-201ENSMUST00000195851 400 ntBASIC19.33■□□□□ 0.68
Usp16Q99LG0 Gm43575-201ENSMUST00000196420 516 ntBASIC19.33■□□□□ 0.68
Usp16Q99LG0 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Usp16Q99LG0 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Usp16Q99LG0 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC19.33■□□□□ 0.68
Usp16Q99LG0 CT010506.4-201ENSMUST00000225457 351 ntBASIC19.33■□□□□ 0.68
Usp16Q99LG0 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp16Q99LG0 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC19.33■□□□□ 0.68
Usp16Q99LG0 Gm10154-201ENSMUST00000084445 354 ntBASIC19.33■□□□□ 0.68
Usp16Q99LG0 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC19.33■□□□□ 0.68
Usp16Q99LG0 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp16Q99LG0 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Usp16Q99LG0 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp16Q99LG0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC19.33■□□□□ 0.68
Usp16Q99LG0 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp16Q99LG0 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp16Q99LG0 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
Usp16Q99LG0 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp16Q99LG0 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp16Q99LG0 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp16Q99LG0 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp16Q99LG0 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp16Q99LG0 Tfap2a-203ENSMUST00000223869 2037 ntBASIC19.32■□□□□ 0.68
Usp16Q99LG0 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Usp16Q99LG0 Gm43352-201ENSMUST00000196419 3065 ntBASIC19.32■□□□□ 0.68
Usp16Q99LG0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp16Q99LG0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp16Q99LG0 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Usp16Q99LG0 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp16Q99LG0 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC19.32■□□□□ 0.68
Usp16Q99LG0 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms