Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RtcbQ99LF4 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RtcbQ99LF4 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RtcbQ99LF4 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC18.63■□□□□ 0.57
RtcbQ99LF4 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RtcbQ99LF4 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RtcbQ99LF4 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RtcbQ99LF4 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.63■□□□□ 0.57
RtcbQ99LF4 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RtcbQ99LF4 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.63■□□□□ 0.57
RtcbQ99LF4 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RtcbQ99LF4 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC18.63■□□□□ 0.57
RtcbQ99LF4 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC18.63■□□□□ 0.57
RtcbQ99LF4 Gm6745-201ENSMUST00000199216 526 ntBASIC18.63■□□□□ 0.57
RtcbQ99LF4 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RtcbQ99LF4 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RtcbQ99LF4 Gm6263-201ENSMUST00000120029 1342 ntBASIC18.63■□□□□ 0.57
RtcbQ99LF4 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RtcbQ99LF4 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RtcbQ99LF4 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RtcbQ99LF4 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RtcbQ99LF4 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RtcbQ99LF4 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RtcbQ99LF4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RtcbQ99LF4 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RtcbQ99LF4 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RtcbQ99LF4 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC18.62■□□□□ 0.57
RtcbQ99LF4 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC18.62■□□□□ 0.57
RtcbQ99LF4 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC18.62■□□□□ 0.57
RtcbQ99LF4 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RtcbQ99LF4 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RtcbQ99LF4 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC18.62■□□□□ 0.57
RtcbQ99LF4 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RtcbQ99LF4 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RtcbQ99LF4 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RtcbQ99LF4 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RtcbQ99LF4 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RtcbQ99LF4 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RtcbQ99LF4 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.62■□□□□ 0.57
RtcbQ99LF4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RtcbQ99LF4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.62■□□□□ 0.57
RtcbQ99LF4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RtcbQ99LF4 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RtcbQ99LF4 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RtcbQ99LF4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RtcbQ99LF4 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.61■□□□□ 0.57
RtcbQ99LF4 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RtcbQ99LF4 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RtcbQ99LF4 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RtcbQ99LF4 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RtcbQ99LF4 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.61■□□□□ 0.57
RtcbQ99LF4 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.61■□□□□ 0.57
RtcbQ99LF4 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RtcbQ99LF4 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RtcbQ99LF4 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RtcbQ99LF4 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RtcbQ99LF4 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RtcbQ99LF4 Gm6756-201ENSMUST00000180647 1620 ntBASIC18.61■□□□□ 0.57
RtcbQ99LF4 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RtcbQ99LF4 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RtcbQ99LF4 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RtcbQ99LF4 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RtcbQ99LF4 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RtcbQ99LF4 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RtcbQ99LF4 Gm23984-201ENSMUST00000157139 203 ntBASIC18.61■□□□□ 0.57
RtcbQ99LF4 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC18.61■□□□□ 0.57
RtcbQ99LF4 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC18.61■□□□□ 0.57
RtcbQ99LF4 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC18.61■□□□□ 0.57
RtcbQ99LF4 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RtcbQ99LF4 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RtcbQ99LF4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
RtcbQ99LF4 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RtcbQ99LF4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RtcbQ99LF4 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.6■□□□□ 0.57
RtcbQ99LF4 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RtcbQ99LF4 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RtcbQ99LF4 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RtcbQ99LF4 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RtcbQ99LF4 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RtcbQ99LF4 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RtcbQ99LF4 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RtcbQ99LF4 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RtcbQ99LF4 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RtcbQ99LF4 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RtcbQ99LF4 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RtcbQ99LF4 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RtcbQ99LF4 Mir1897-201ENSMUST00000122581 272 ntBASIC18.6■□□□□ 0.57
RtcbQ99LF4 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RtcbQ99LF4 Cd63-ps-201ENSMUST00000145417 875 ntBASIC18.6■□□□□ 0.57
RtcbQ99LF4 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC18.6■□□□□ 0.57
RtcbQ99LF4 Gm8515-201ENSMUST00000194852 576 ntBASIC18.6■□□□□ 0.57
RtcbQ99LF4 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RtcbQ99LF4 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RtcbQ99LF4 Gm6180-201ENSMUST00000065243 498 ntBASIC18.6■□□□□ 0.57
RtcbQ99LF4 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RtcbQ99LF4 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RtcbQ99LF4 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RtcbQ99LF4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RtcbQ99LF4 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RtcbQ99LF4 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms