Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Thumpd1Q99J36 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Thumpd1Q99J36 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Thumpd1Q99J36 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Thumpd1Q99J36 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.54□□□□□ -0.24
Thumpd1Q99J36 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Thumpd1Q99J36 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Thumpd1Q99J36 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Thumpd1Q99J36 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Thumpd1Q99J36 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Thumpd1Q99J36 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Thumpd1Q99J36 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Thumpd1Q99J36 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Thumpd1Q99J36 Gm45328-201ENSMUST00000210942 917 ntBASIC13.54□□□□□ -0.24
Thumpd1Q99J36 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Thumpd1Q99J36 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Thumpd1Q99J36 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Thumpd1Q99J36 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Thumpd1Q99J36 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Thumpd1Q99J36 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Thumpd1Q99J36 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Thumpd1Q99J36 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Thumpd1Q99J36 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Thumpd1Q99J36 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Thumpd1Q99J36 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Thumpd1Q99J36 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Thumpd1Q99J36 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.53□□□□□ -0.24
Thumpd1Q99J36 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.53□□□□□ -0.24
Thumpd1Q99J36 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd1Q99J36 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd1Q99J36 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd1Q99J36 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd1Q99J36 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.53□□□□□ -0.24
Thumpd1Q99J36 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd1Q99J36 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd1Q99J36 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Thumpd1Q99J36 Gm15039-201ENSMUST00000118914 875 ntBASIC13.53□□□□□ -0.24
Thumpd1Q99J36 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd1Q99J36 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd1Q99J36 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.53□□□□□ -0.24
Thumpd1Q99J36 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Thumpd1Q99J36 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.53□□□□□ -0.24
Thumpd1Q99J36 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd1Q99J36 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd1Q99J36 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd1Q99J36 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.53□□□□□ -0.24
Thumpd1Q99J36 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd1Q99J36 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd1Q99J36 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd1Q99J36 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd1Q99J36 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd1Q99J36 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd1Q99J36 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd1Q99J36 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd1Q99J36 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd1Q99J36 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd1Q99J36 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd1Q99J36 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Thumpd1Q99J36 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
Thumpd1Q99J36 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Thumpd1Q99J36 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Thumpd1Q99J36 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Thumpd1Q99J36 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Thumpd1Q99J36 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thumpd1Q99J36 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Thumpd1Q99J36 Gm10013-201ENSMUST00000106074 672 ntBASIC13.52□□□□□ -0.25
Thumpd1Q99J36 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thumpd1Q99J36 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.52□□□□□ -0.25
Thumpd1Q99J36 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.52□□□□□ -0.25
Thumpd1Q99J36 Rprl3-201ENSMUST00000157400 290 ntBASIC13.52□□□□□ -0.25
Thumpd1Q99J36 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.52□□□□□ -0.25
Thumpd1Q99J36 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.52□□□□□ -0.25
Thumpd1Q99J36 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.52□□□□□ -0.25
Thumpd1Q99J36 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Thumpd1Q99J36 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.52□□□□□ -0.25
Thumpd1Q99J36 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.52□□□□□ -0.25
Thumpd1Q99J36 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thumpd1Q99J36 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thumpd1Q99J36 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thumpd1Q99J36 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thumpd1Q99J36 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Thumpd1Q99J36 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Thumpd1Q99J36 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.52□□□□□ -0.25
Thumpd1Q99J36 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Thumpd1Q99J36 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thumpd1Q99J36 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Thumpd1Q99J36 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thumpd1Q99J36 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thumpd1Q99J36 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thumpd1Q99J36 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Thumpd1Q99J36 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Thumpd1Q99J36 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Thumpd1Q99J36 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Thumpd1Q99J36 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Thumpd1Q99J36 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.51□□□□□ -0.25
Thumpd1Q99J36 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thumpd1Q99J36 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thumpd1Q99J36 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thumpd1Q99J36 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Thumpd1Q99J36 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms