Protein–RNA interactions for Protein: Q923D4

Sf3b5, Splicing factor 3B subunit 5, mousemouse

Known RBP Predictions only

Length 86 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b5Q923D4 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3b5Q923D4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3b5Q923D4 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.38□□□□□ -0.27
Sf3b5Q923D4 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.38□□□□□ -0.27
Sf3b5Q923D4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.38□□□□□ -0.27
Sf3b5Q923D4 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3b5Q923D4 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3b5Q923D4 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Sf3b5Q923D4 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3b5Q923D4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3b5Q923D4 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3b5Q923D4 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3b5Q923D4 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Gm12008-201ENSMUST00000117791 755 ntBASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Gm43767-201ENSMUST00000198933 381 ntBASIC13.37□□□□□ -0.27
Sf3b5Q923D4 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b5Q923D4 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b5Q923D4 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.36□□□□□ -0.27
Sf3b5Q923D4 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b5Q923D4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b5Q923D4 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b5Q923D4 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b5Q923D4 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b5Q923D4 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b5Q923D4 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.36□□□□□ -0.27
Sf3b5Q923D4 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b5Q923D4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b5Q923D4 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b5Q923D4 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.36□□□□□ -0.27
Sf3b5Q923D4 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.36□□□□□ -0.27
Sf3b5Q923D4 Gm2272-201ENSMUST00000194903 582 ntBASIC13.36□□□□□ -0.27
Sf3b5Q923D4 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b5Q923D4 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b5Q923D4 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b5Q923D4 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Sf3b5Q923D4 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b5Q923D4 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b5Q923D4 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b5Q923D4 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b5Q923D4 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.36□□□□□ -0.27
Sf3b5Q923D4 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b5Q923D4 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b5Q923D4 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b5Q923D4 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b5Q923D4 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b5Q923D4 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Sf3b5Q923D4 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b5Q923D4 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Sf3b5Q923D4 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b5Q923D4 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b5Q923D4 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b5Q923D4 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.35□□□□□ -0.27
Sf3b5Q923D4 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Sf3b5Q923D4 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b5Q923D4 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b5Q923D4 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.35□□□□□ -0.27
Sf3b5Q923D4 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b5Q923D4 Gm43514-201ENSMUST00000198852 424 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms