Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Smc1bQ920F6 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smc1bQ920F6 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Smc1bQ920F6 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smc1bQ920F6 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smc1bQ920F6 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smc1bQ920F6 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc1bQ920F6 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.5■□□□□ 0.39
Smc1bQ920F6 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc1bQ920F6 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc1bQ920F6 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc1bQ920F6 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Smc1bQ920F6 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc1bQ920F6 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc1bQ920F6 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.5■□□□□ 0.39
Smc1bQ920F6 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smc1bQ920F6 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.5■□□□□ 0.39
Smc1bQ920F6 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Smc1bQ920F6 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.5■□□□□ 0.39
Smc1bQ920F6 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smc1bQ920F6 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Smc1bQ920F6 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.5■□□□□ 0.39
Smc1bQ920F6 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smc1bQ920F6 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc1bQ920F6 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc1bQ920F6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc1bQ920F6 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Smc1bQ920F6 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc1bQ920F6 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc1bQ920F6 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smc1bQ920F6 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.5■□□□□ 0.39
Smc1bQ920F6 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc1bQ920F6 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc1bQ920F6 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smc1bQ920F6 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc1bQ920F6 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc1bQ920F6 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc1bQ920F6 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc1bQ920F6 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.49■□□□□ 0.39
Smc1bQ920F6 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smc1bQ920F6 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.49■□□□□ 0.39
Smc1bQ920F6 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Smc1bQ920F6 Gm8344-201ENSMUST00000119813 856 ntBASIC17.49■□□□□ 0.39
Smc1bQ920F6 Gm13365-201ENSMUST00000121188 973 ntBASIC17.49■□□□□ 0.39
Smc1bQ920F6 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.49■□□□□ 0.39
Smc1bQ920F6 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.49■□□□□ 0.39
Smc1bQ920F6 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.49■□□□□ 0.39
Smc1bQ920F6 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc1bQ920F6 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc1bQ920F6 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smc1bQ920F6 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smc1bQ920F6 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc1bQ920F6 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc1bQ920F6 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smc1bQ920F6 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.49■□□□□ 0.39
Smc1bQ920F6 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Smc1bQ920F6 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc1bQ920F6 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc1bQ920F6 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smc1bQ920F6 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc1bQ920F6 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1bQ920F6 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Smc1bQ920F6 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Smc1bQ920F6 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1bQ920F6 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1bQ920F6 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1bQ920F6 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.48■□□□□ 0.39
Smc1bQ920F6 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1bQ920F6 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1bQ920F6 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1bQ920F6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Smc1bQ920F6 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1bQ920F6 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1bQ920F6 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1bQ920F6 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1bQ920F6 Gm5745-201ENSMUST00000183748 313 ntBASIC17.48■□□□□ 0.39
Smc1bQ920F6 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.48■□□□□ 0.39
Smc1bQ920F6 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.48■□□□□ 0.39
Smc1bQ920F6 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1bQ920F6 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1bQ920F6 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1bQ920F6 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1bQ920F6 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1bQ920F6 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1bQ920F6 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.48■□□□□ 0.39
Smc1bQ920F6 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1bQ920F6 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Smc1bQ920F6 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1bQ920F6 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1bQ920F6 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc1bQ920F6 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc1bQ920F6 Asic1-205ENSMUST00000228185 1818 ntBASIC17.47■□□□□ 0.39
Smc1bQ920F6 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc1bQ920F6 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc1bQ920F6 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc1bQ920F6 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc1bQ920F6 Gm15427-201ENSMUST00000117288 531 ntBASIC17.47■□□□□ 0.39
Smc1bQ920F6 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.47■□□□□ 0.39
Smc1bQ920F6 Gm13597-201ENSMUST00000121239 375 ntBASIC17.47■□□□□ 0.39
Smc1bQ920F6 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms